| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_06007 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Aspergillus nidulans FGSC A4 |
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| Kingdom | Eukaryota |
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| Replicon accession | BN001301 |
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| Strand | + |
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| Start bp | 1524228 |
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| End bp | 1528405 |
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| Gene Length | 4178 bp |
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| Protein Length | 1293 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | DEAD/DEAH box RNA helicase (Ski2), putative (AFU_orthologue; AFUA_2G10000) |
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| Protein accession | CBF70374 |
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| Protein GI | 259479810 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.542014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAC TCAGTTCAAC CTTAGCCCAG CTCGATCTGG GCTCGCAGAA TATTGGCGGA
AAGGCTTTTG ATGAGCTCAT TGCCGCTGAA GGGAATGGGA CGTATCAGAA CCGCGCACGC
AAGCGCAGAG CTCGCCCATC CGCCGCGGAA CTGCGACGCG ATCTAGAGAA CGAGTTTCTA
ACCCCATCCC CTCGGTTTAG CTCCGAGTGG TTAAACCGCC TGCAGAGGTA GGGTTGATGA
CCTTTGATGT TGTTATAATC TATATAATCT TACCTATGGT TCTGCTTCCT CTCTGCAGTG
TGCTAACGGG AAACTAGGAG ATGGGATGTA TCAACGGACT ACACGGATCT CTTTGAGATC
GCTGATACAC AAACCCGAAC AATCGTTCGA TTCGACCGCG AAGGCCTAGA GGGGCGTGTC
ACTGGGTATC ATGAAGTGAC GGTTCCGGCT AACAGCGCGA ACGCAAAAAA CTCGACGTCT
TTGCTACGCA GGCCAGCAGG AAGGGCTGAT TTCGTGCGGG GCGCTGCAGG GTTCTTTCCG
TTCGCGCCAG GGGGTCTGGA TGGCGTTGAG GCGATCGCGG AGATGGAGGC TGAAGTTCAG
ACAGCAGGGC CCTCTGGGTC TGCTGGAAAA CAGGCCGGCC TGGATCGCAT CATTAACTTC
GCGTCTGAGG GGGGTTTATT AGAGGTAGCT CCTGGATTTT CGCGCGGACT GAAATTTGAA
GAAGCAAAGT CGAAAGAAGC TGCGGACGAC GATGAAGAAG TCGAACAGAC TCTCCAGGAA
GAGGAAAGCA ACATCAATCC TGAACAGGAT GAAACAGCAT CCGACGTGGG AGGTGTGAAG
ATCGAAGACG AGGAATCCGC CAGTGAGGAC GAGGAAGAAG ACGATATCGA CACCCTATTA
CCTGTCGAGT TCCCGTCTTT GGAGCCGCGT GCTCCGCTGC TCTCAGCCTT CCAGAAAAAG
GGTGGCAAAG AATGGGCACA CGTCGTGGAT GTTAATAAGG AAATTTCCAA TTTCCACGAA
CTCGTTCCAG ATATGGCTCG CGAATGGCCA TTCGAGCTGG ACACGTTCCA GAAAGAAGCT
GTCTATCACC TCGAGAATGG GGATTCTGTT TTCGTGGCTG CACATACGTC AGCTGGTAAA
ACTGTCGTTG CGGAGTATGC TATTGCATTG GCCGCTAAGC ATATGACAAA GGCAATCTAT
ACGTCCCCGA TCAAAGCCCT GAGTAACCAA AAATTTCGCG ATTTCAAGAA TACCTTTGAC
GATGTAGGTA TTCTGACGGG TGATGTTCAA ATCAATCCGG AAGCAAGTTG TCTGATCATG
ACCACTGAGA TTCTGCGGAG TATGCTTTAC CGTGGAGCAG ACCTCATTAG AGATGTGGAA
TTCGTGATTT TTGACGAGGT CCACTACGTG AACGACCTTG AACGCGGTGT CGTATGGGAG
GAGGTTATCA TCATGCTTCC TGAGCACGTC ACTCTCATCC TTCTTTCTGC TACAGTACCC
AATACCCAGG AATTCGCCTC GTGGGTGGGC AGGACGAAAA AAAAGGATAT TTATGTCATC
TCGACCGCGA AGAGACCTGT ACCTCTTGAA CACTATCTTT GGGCTGGAAA GGACAAGTTC
AAGATTGTTG ACTCCAACAA AAGGTTCCTC GAAAGCGGCT GGAAACAAGC AGATGATATA
ATATCCGGCA AGGACAAGAT CAAAGCTCAG AAAGCAGCAG AAGCTCAAGC GCAGTCTCAA
GCAAGCAGAG GTGGTTCACA GGGACGGGGA CGGGGACAAG CGCCCGCCAG GGGTGGCCCG
AGGGGAGGGG GAGGAGGACA ACGTGGAGGA GGACAACGAG GCCGAGGCCA GCCGGCAAAC
CGAGGAACAG GCAACATTGC TCGTACAGGG AGAGGCGGCG GACGTACAAC TGCCGCACAG
GACAAGACTG TCTGGGTCCA GGTTGTGCAA CATCTGCGCA AGGAGAATCT GTTGCCAGCC
TGTATCTTCG TATTTTCTAA GAAAAGATGT GAACAGAACG CCGACTCATT GTCCAACCAG
GACTTTTGCA ATGCGTCCGA GAAAAGCCTT ATTCATATAA CGATCGAAAA GTCCCTTACT
CGACTCAAAC AGGAAGACAG GACGCTGCCG CAGATTCTTC GACTTCGCGA ACTGCTAAGT
CGCGGTATTG CTGTTCACCA TGGTGGGCTT CTACCGATAA TGAAAGAAAT CGTCGAGATC
CTGTTTGCCA AGACTCTTGT TAAAGTTCTC TTCGCCACTG AGACATTTGC CATGGGCCTG
AACCTGCCTA CACGTACAGT GGTCTTCTCG GGATTTCGCA AGCATGATGG CAAAGGTTTC
AGAGATCTAC TGCCCGGCGA ATATACCCAA ATGGCGGGGC GTGCCGGTCG AAGAGGTCTC
GACAACGTCG GCTATGTGAT TGTTGTTAAC TCTGGCAAGG ACGAGGCACC GCCTGCTGGA
GCGTTGAGAA AGATGATCCT CGGGGACCCA ACGAAACTTC GATCCCAGTT CAGGCTGACT
TATAACATGA TCCTGAATCT ACTGCGTGTG GAAGCTCTGA AGATTGAAGA AATGATCAAG
AGAAGTTTCA GCGAAAATGC CACCCAGGCC CTGCTCCCAG AGCACGAGAA ACAGGTACAA
ATTTCTGAAG CCAGCTTAGA AAAGATCAAG CGAGAGCCCT GCGAGATCTG CGATGTTGAT
CTCGCTGCCT GTCATGATGC ATCGATCGAG TATGGAAAAT TGACGAGCGA GCTACACCTC
AACCTACTTT CATCGCCTGT CGGCAAACGC CTTCTTATGC CGAAGCGCTT AGTTGTATAC
CGGAAGGTGA TTAATGGATC TCCATAATTA GCCGCAGCTT AAGCTGACAC TTTGCAGGAT
GGATACCGAA CCGCAGGTGT CATTGTGCGA GAAGTCGGAG GGGGCCCCAA CCCCGTCATA
CAGATTCTCG AGATAGGTAA ACTGAACAGC AAGCGTCACC CAAGCGAGAT TCTCCCATTC
CTTCCAGCGT TCAGGGGATT TCTGAATCCT CTACCGACCC GTGCCGCCGA TATGACTCTG
AAAGTTTTTA AGATCCCAAT TGCGGATATC GAGTGCGTCA CAAACACTAT AGTCAAACTG
AGTGGCCCAA CGTGGTACCT CAATATCAAG AAAGGTTGGT CTCAATGCAT TTGGTACAAG
GGTCTTGCTG ACATTAGTTT AAAGAGGCAA TCAGATTCGC AGACAAGGAG CTATCCAAGC
TATGCTCCTC GTGGACTACT CCGGTCTGGG ATGAGCTAGA TTGGGCTCGA ATCAAGGAGC
TCCAATTAAG GGACATCCTA GATAAACGAC GAGAGCAGGC AAATATCGCC CAGTCATGCG
ACTGCCTGAA ATGCCCCAAA TTCTTGAAAC ACGTATGTTC ATATTCTACC CTTTGACGAT
TCCTGCCATA CTCACGACCT TTTAGTTTGA GATGCAACGT GATGAGTGGC AAATTAAGGA
GAATATCTCG CAGTTGAAGC AACTCATGTC GGATCAGAAC CTCCAACTAC TCCCAGACTA
CGAGCAGCGT ATTCAAGTAC TAAAAGACTT GGGCTTCGTT GACGAACAAT CCCGTGTGCA
GCTGAAAGGA AAGGTAGCTT GCGAGGTAAG ACTTCAAAAT AAGGTATTCT CCATAAATGT
GCTGAGACAT GTGTTAGATT CATTCTGCGG ATGAGCTCGT TTTGACGGAG CTTATATTGG
AAAACGTTCT CGCGGAATAC GAACCCGAAG AGATAGTCGC TTTACTATCC GCTTTTGTGT
TCCAAGAAAA GACAGAAAAT GTGCCGACCT TGAACCCCCG TCTGGAGAAG GGCAAGGAAG
CAATTATTCG CATTTCCGAG AAGGTGAACG ATGTGCAGAT ACAGCACCAG GTCCTTCAGT
CGACCGAGGA TATCAACGAT TTTGCCAGCC AACCGCGATT TGGACTGGCA GAGGTGGTTT
ACGAGTGGGC CAAGGGGATG TCGTTCAACC GGATTACGGA TCTCACGGAT GTGATGGAGG
GAACCATTGT CAGGACTATT ACTCGGCTCG ACGAGACCTG TCGCGAGGTG AAGAATGCAG
CCAAATTGGT TGGAGATCCA ACGCTGTACG CAAAGATGCA AGAAGCGCAG GAGAAGATCA
AGAGGGATGT GATCTTCGCG GCGTCTCTGT ATATGTAG
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| Protein sequence | METLSSTLAQ LDLGSQNIGG KAFDELIAAE GNGTYQNRAR KRRARPSAAE LRRDLENEFL
TPSPRFSSEW LNRLQRRWDV STDYTDLFEI ADTQTRTIVR FDREGLEGRV TGYHEVTVPA
NSANAKNSTS LLRRPAGRAD FVRGAAGFFP FAPGGLDGVE AIAEMEAEVQ TAGPSGSAGK
QAGLDRIINF ASEGGLLEVA PGFSRGLKFE EAKSKEAADD DEEVEQTLQE EESNINPEQD
ETASDVGGVK IEDEESASED EEEDDIDTLL PVEFPSLEPR APLLSAFQKK GGKEWAHVVD
VNKEISNFHE LVPDMAREWP FELDTFQKEA VYHLENGDSV FVAAHTSAGK TVVAEYAIAL
AAKHMTKAIY TSPIKALSNQ KFRDFKNTFD DVGILTGDVQ INPEASCLIM TTEILRSMLY
RGADLIRDVE FVIFDEVHYV NDLERGVVWE EVIIMLPEHV TLILLSATVP NTQEFASWVG
RTKKKDIYVI STAKRPVPLE HYLWAGKDKF KIVDSNKRFL ESGWKQADDI ISGKDKIKAQ
KAAEAQAQSQ ASRGGSQGRG RGQAPARGGP RGGGGGQRGG GQRGRGQPAN RGTGNIARTG
RGGGRTTAAQ DKTVWVQVVQ HLRKENLLPA CIFVFSKKRC EQNADSLSNQ DFCNASEKSL
IHITIEKSLT RLKQEDRTLP QILRLRELLS RGIAVHHGGL LPIMKEIVEI LFAKTLVKVL
FATETFAMGL NLPTRTVVFS GFRKHDGKGF RDLLPGEYTQ MAGRAGRRGL DNVGYVIVVN
SGKDEAPPAG ALRKMILGDP TKLRSQFRLT YNMILNLLRV EALKIEEMIK RSFSENATQA
LLPEHEKQVQ ISEASLEKIK REPCEICDVD LAACHDASIE YGKLTSELHL NLLSSPVGKR
LLMPKRLVVY RKDGYRTAGV IVREVGGGPN PVIQILEIGK LNSKRHPSEI LPFLPAFRGF
LNPLPTRAAD MTLKVFKIPI ADIECVTNTI VKLSGPTWYL NIKKEAIRFA DKELSKLCSS
WTTPVWDELD WARIKELQLR DILDKRREQA NIAQSCDCLK CPKFLKHFEM QRDEWQIKEN
ISQLKQLMSD QNLQLLPDYE QRIQVLKDLG FVDEQSRVQL KGKVACEIHS ADELVLTELI
LENVLAEYEP EEIVALLSAF VFQEKTENVP TLNPRLEKGK EAIIRISEKV NDVQIQHQVL
QSTEDINDFA SQPRFGLAEV VYEWAKGMSF NRITDLTDVM EGTIVRTITR LDETCREVKN
AAKLVGDPTL YAKMQEAQEK IKRDVIFAAS LYM
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