Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_04405 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001303 |
Strand | - |
Start bp | 2140560 |
End bp | 2142213 |
Gene Length | 1654 bp |
Protein Length | 418 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | sphingolipid desaturase, putative (AFU_orthologue; AFUA_4G06940) |
Protein accession | CBF77594 |
Protein GI | 259482784 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.314247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GAACTGCTAT AACCCCTTTT CATTCAAAAA AAACTTCTCC TTCTCCTCCT TTATCCTCGC ACCATGGCCT CGACAATCGC CTCCTCTGCT ACACCGCAGC TCCGCATGTC AGCCACGAAG AATCGCCGCA AAGCTCCAGA CCTACGAAAT GATGAACCCT CAGTGCGAAT CCCGCCTCCA GAGACTTCTT CTATCGAGGA CCATTTCTTC TGGACCTACA CGGAGGAGCC GCACCGTTCA CGACGGCAAG CAATCATCAA AGCACACCCA GAAGTACGTC TCTCCGCCTC ACTTCCGACT CTGTGCTTCA GAGAGCTAAC TCGTACGATC TTCCAGGTAA CCAAGCTCTG CGGACCAGAG CCGTTAACCA AATACGTGGT GCTGGGCGTT GTTTCCCTCC AGATATGCTG CGCATACCTT CTCCGCGAAA CGTCCTTCTT CTCCTGGCGG TTCTGGTTAA CGGCGTACGT GATCGGAGCC ACTTCGAACC AAAACCTCTT CCTTGCCATC CATGAAATAT CACATAACCT CGCTTTCCGG TCACCTATGG CAAATAGGCT CCTGGCTATC TTTGCCAATC TTCCCATTGG ATTGCCCTAC AGCGCCGCTT TCAGGGTATG CATATACTAA ACTCCTTTGG TTCGCAATAG AAAAAGAAAC TGATCATATG CAATAGCCCT ACCATCTCAC CCACCACAAA TCCCTCGGCG TCGCTGGCCT CGACACCGAT CTTCCTACAG CCTTCGAAGC CTTCGTACTC GACTCTCTCC TCGGCAAAGC CTTCTTTTGC ACCTTCCAAA TCTTCTTCTA TGCTGTCCGC CCCATGTTTA TCTACAGTCC GCCCTTCACA ATAATTCACC TCATAAACCT CTTCGTCCAA TTCTCCTTCA ACTACATACT CACAAAGATC TGCAACGGCT CCCTCAACCC ACTCCTCTAC CTCCTTCTCA GCTCCTTCCT CGCGGGTTCC CTCCACCCCT GCGCAGGCCA CTTCATCGCC GAGCACTACT TTTTTTCAAA TGTAGACCAT GGCACAGAAT CACTCCGGGA ACTGAAGGGG GAAAAGGGCG AAAAACATCC TCTCACCTCC CTTCCGCCTC CGGAAACGTA CTCATATTAC GGCCCGCTTA ACATTCTCAC CTACAACGTT GGTCTGCACA ATGAGCACCA CGATTTCCCC GCTATTCCGT GGACAAAACT TCATACCCTC CACCGAATTG CTAGCGAGTT TTACGAGCCT TTACCCTGCC ACCGGAGCTG GGTCTGGGTT ATTTGGACCT TTATCCTAGA TGAGAATGTC GGTCCGTGGT GCCGTGTTAA GAGGGCACAA GGTGGTCGTC TTGTGGGAGG TGGTGATGCC ACCGGTCGTG CAGGAGAGGG AATTTCCGCT GGGCCCGACG AGGCAAATGA TGATGGGTGG AAAGAGAGCG AGATTCAGAA TTGATCTGGT TTAAATAGGT CTACCCATAT ATGTAGCTTA GGCAGATTTT CGCTATCTTT CTATTCCTCT CTATTGGATC GATTCGGATG ATAACTGGGT AATCGCATAT CTTTGCGCAC TTCGGTATGT ACGCTATGGA TGCTTGCAGT ATCGGAGATA ATGATTTCCT ATCATCCATA TGATATATAG TCTGCACACC CTAAATACTA CAAC
|
Protein sequence | MASTIASSAT PQLRMSATKN RRKAPDLRND EPSVRIPPPE TSSIEDHFFW TYTEEPHRSR RQAIIKAHPE VTKLCGPEPL TKYVVLGVVS LQICCAYLLR ETSFFSWRFW LTAYVIGATS NQNLFLAIHE ISHNLAFRSP MANRLLAIFA NLPIGLPYSA AFRPYHLTHH KSLGVAGLDT DLPTAFEAFV LDSLLGKAFF CTFQIFFYAV RPMFIYSPPF TIIHLINLFV QFSFNYILTK ICNGSLNPLL YLLLSSFLAG SLHPCAGHFI AEHYFFSNVD HGTESLRELK GEKGEKHPLT SLPPPETYSY YGPLNILTYN VGLHNEHHDF PAIPWTKLHT LHRIASEFYE PLPCHRSWVW VIWTFILDEN VGPWCRVKRA QGGRLVGGGD ATGRAGEGIS AGPDEANDDG WKESEIQN
|
| |