| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_03176 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001306 |
|---|
| Strand | + |
|---|
| Start bp | 1528717 |
|---|
| End bp | 1530738 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent rRNA helicase spb4 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5B8F4] |
|---|
| Protein accession | CBF83255 |
|---|
| Protein GI | 259485867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.541811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCGA AACCTCCGTC AGGGACATCG TCCCGAGCCT GGGACGCTGT GAATCCTCCG
CTGTCGGAAT GGGTGCTTGA CGCTGTCTCC TCGATGGGGT TCACCCGCAT GACACCGGTC
CAAGCATCGG CCATTCCTCT ATTTATGGCT CACAAGGATG TTGTCGTTGA GGCTGTCACT
GGGAGCGGAA AGACTCTTTC ATTCTTGATT CCAGTAGTGG AGAAGTTGTT GCGCCTTGAA
GAGCCCATCA AGAAGCATCA TGTCGGCGCC ATCATCGTTT CTCCAACAAG GTATTTGGCT
TAAAGCAGGT CGAGCTAATG GAGATGTCCA TGCTGACTCT TCGCAGAGAA CTCGCTTCGC
AGATCTACAA CGTTTTGACA TCCCTACTCG CGTTCCATCC CGCTTCGGCG GCTGTGATAA
ACACTTCCGA AACCGAAGAC GTTCCCCGGC CTAAACACTC TTCCTCCGTT CTTAGAGTCG
TTCCGCAGCT CCTGCTTGGA GGCTCGACCT CGCCTGCAGA AGATCTGAGC ACCTTTTTGA
AGCGCTCTCC GAACCTCTTG GTGGCTACTC CGGGTAGACT TCTCGAGTTG CTTTCCTCCC
CGCACGTTTA CTGCCCACAA TCGTCCTTTG AGATGCTTGT CTTAGATGAA GCGGACAGGT
TGTTGGATCT TGGCTTCAAG GAAACACTGC AGAACATTTT GCGCCGACTT CCGAAACAAA
GGCGGACGGG GCTTTTCAGT GCTAGTGTAA GCGAAGCTGT TGATCAGATT GTCCGCGTCG
GCCTGCGTAA TCCTGTCAAG GTCGTGGTCA AGGTCAAGGG GGCGTCGGGA GTTGATGACA
AGCGTACCCC CGCCAGGTTG GCACTTCTTT ACCCTTCTAT ACTCTCATAT ACTTATTTGA
TGCAGCCTTC AAATGACCTA TTTGACTCAA CCACCAACCG GTAAATTTCC AGCACTAAAG
CACATTCTTA ATTCAGTGCA ACCGACGCCC TCCAAATCAA TATTCTTCGT GTCAACTTGC
TCAGGTGTCG ACTACTTATC TGTCATCCTC CCGTTGATAC TTGGCAACGA TTTCCAGTTA
ATACCTCTTC ACGGAAAACA CCCTGCAAAC GTGCGTCAAA AGAATTTCAA CCGTTTCGTT
AACGCTCACA ACCCGGCCAT CCTTCTCACC ACAGACGTCG CTTCCCGCGG GCTGGACATT
CCGTCGGTGG ACCTCGTCGT TCAGATAGAC CCTCCTTCGG ACCCAAAGAC CTTCATTCAT
CGATGCGGTC GTGCCGGCAG AGCCGGTCGT AGAGGTCTTA GTGTGGTTCT GCTCCATCCG
GGCAGGGAAG AAGATTACGT CTCCTTCCTA GAAGTACGGA AGACCCCAGT TGCGCCTTTT
CCGCACCCCA TCACTGTTTC CGACGCCGAA GCCGCCGCCG CTACAGAAAC TGCTCGGAAA
GTAGTAAAGG CAGACCGCGC AATCCATGAC CGCGGCCAAA AGGCCTTTGT TAGTTGGCTA
AGGAGCTACA GCAAACATCA AGCAAGCAGC ATTTTCCGCG TCGCGGACCT GGACTGGGAG
GGCCTAGGGA AAGCGTGGGG ACTACTGAAG CTGCCGAAGA TGCCCGAATT GAAAAATTTC
AAGGGAGACA AAACTCTTGG TGTCCAAATG GATTGGGATA CGTACGCATA CAAGGATAAG
CAGCGCGAGA AGCGTCGCTT AGAGCTCCTA CAAGAGATGG CGGAATCTGG CCAACAACAA
ACAACGAACA AGAAGCGTCC GAACGAGACT GTGGCCTGGA GCAACAATGC TGAGAACAGA
AACAAGAAGG CCAAACGGCG CGACATGAAA CAGGTGCGGC AGGAGAGGAA GCGGTGGGAG
AAGATGACGG AGGAAGAGAA GAAGAAGGCT CTCGAGACAG AGCAGATGCT CGAGCAAATT
AGGGCAAAAA ATGAAGAGCA AAGGCGGCTG AAACGCGCAG CTGCTAAAGC GGACAAGGAC
GCAGAGGAAG GTGGAGACGA GGAATTCACG GGCTTCGACT AG
|
|---|
| Protein sequence | MAPKPPSGTS SRAWDAVNPP LSEWVLDAVS SMGFTRMTPV QASAIPLFMA HKDVVVEAVT
GSGKTLSFLI PVVEKLLRLE EPIKKHHVGA IIVSPTRELA SQIYNVLTSL LAFHPASAAV
INTSETEDVP RPKHSSSVLR VVPQLLLGGS TSPAEDLSTF LKRSPNLLVA TPGRLLELLS
SPHVYCPQSS FEMLVLDEAD RLLDLGFKET LQNILRRLPK QRRTGLFSAS VSEAVDQIVR
VGLRNPVKVV VKVKGASGVD DKRTPASLQM TYLTQPPTGK FPALKHILNS VQPTPSKSIF
FVSTCSGVDY LSVILPLILG NDFQLIPLHG KHPANVRQKN FNRFVNAHNP AILLTTDVAS
RGLDIPSVDL VVQIDPPSDP KTFIHRCGRA GRAGRRGLSV VLLHPGREED YVSFLEVRKT
PVAPFPHPIT VSDAEAAAAT ETARKVVKAD RAIHDRGQKA FVSWLRSYSK HQASSIFRVA
DLDWEGLGKA WGLLKLPKMP ELKNFKGDKT LGVQMDWDTY AYKDKQREKR RLELLQEMAE
SGQQQTTNKK RPNETVAWSN NAENRNKKAK RRDMKQVRQE RKRWEKMTEE EKKKALETEQ
MLEQIRAKNE EQRRLKRAAA KADKDAEEGG DEEFTGFD
|
|---|
| |