| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3089 |
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| Symbol | panD |
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| ID | 7134193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2775436 |
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| End bp | 2775819 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643531440 |
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| Product | aspartate 1-decarboxylase |
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| Protein accession | YP_002427451 |
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| Protein GI | 218667904 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCTGT TAACCCTCCT GAAGGGCAAA CTGCATCGGG TGCGGGTCAC GGCTGTCGAA
CTGGAATACG AGGGTTCCTG TGCGATCGAC AGCGAGCTGC TGGCTGCGGC GGGCATTCAT
CCTTATGAGC AGATACACAT TTACGATGTG AATAACGGTG ACCGATTCAG CACCTATGCG
ATCAGCGCGT CAGCGGGGTC GGGTATCATT TCGGTCAATG GTGCGGCGGC GCGCAGGGTG
TCCCTGGGAG ACGTACTGAT CATCGCCGCC TACGCACAGG TCACCGCAGA TGCCGTGGCC
GGTTTCCGAC CGCAACTGGT CTATGTAGAC GAGCACAATC GCATCATACG GCGCAACCAG
CACATTGACT CCGCCCCTGC CTGA
|
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| Protein sequence | MILLTLLKGK LHRVRVTAVE LEYEGSCAID SELLAAAGIH PYEQIHIYDV NNGDRFSTYA
ISASAGSGII SVNGAAARRV SLGDVLIIAA YAQVTADAVA GFRPQLVYVD EHNRIIRRNQ
HIDSAPA
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