Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3002 |
Symbol | |
ID | 7135477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2691531 |
End bp | 2692226 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643531353 |
Product | TonB family protein |
Protein accession | YP_002427369 |
Protein GI | 218665210 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTGACT CTACCCCTCC TGAGGTTCCT GATAAGCCGT CCCGCTGGAG CTATCAGGGT CAATCAAAAA GTTTTCGTTA TGCCATTATC AGTGCGTTGG CCGTGGAAAT TTCTCTGGTG GCTGGTCTCA TCTTGATTAC GCATGATCAT CCAACACCTA AGAAAACTCC CGAGGTGATC AGCGTAAAAA TTGTTCACCT ACCGCCACCG CCACCACCAC CGCCACCGCC TAAGGTGAAA CCGGTGCCGC ATCCACCCAA ACCGGTAAAA ATACCGGTTC CAGTGGTGCA TCGTCCTGCA CCATTGCCGG TAAAGCCTCC GACGCCTCCG CCACCCCCTA AACAAGTGGT GAAGACGCCA CCTCCGCCGG TTAAAACACC TCCACCTCCA CCAACACCCG CTCCGGTATA TAGCGGAGTC GGAGCTTATG GTTCAGGTGC CAGATCGCAG GTGCGAAACC ATGTTCATGT CTCAGCCATT ATTAAACGAC TGGGTTTGCA AGGTACTGTG GTTGTCAGCT TCCAATTAGG CCCAGCAGGT GGGAAAGCGA AAGACGTGCA TGTGGTGGGT GGTTCACATA ATCCCCTGCT TCGCAAGGCT GCTCTGGCTG CCGTGTCCAA CAGCACGTTT CCGGCATTTA CCAGTCACAT GCCCCCTCAC ACTTTATCGT TCACGGTGCC AATAGATATT TCGTGA
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Protein sequence | MGDSTPPEVP DKPSRWSYQG QSKSFRYAII SALAVEISLV AGLILITHDH PTPKKTPEVI SVKIVHLPPP PPPPPPPKVK PVPHPPKPVK IPVPVVHRPA PLPVKPPTPP PPPKQVVKTP PPPVKTPPPP PTPAPVYSGV GAYGSGARSQ VRNHVHVSAI IKRLGLQGTV VVSFQLGPAG GKAKDVHVVG GSHNPLLRKA ALAAVSNSTF PAFTSHMPPH TLSFTVPIDI S
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