| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2977 |
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| Symbol | gmd-1 |
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| ID | 7136587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2668314 |
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| End bp | 2669333 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643531328 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_002427344 |
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| Protein GI | 218665959 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC ACGCCCTCAT CACCGGCATC ACCGGCCAGG ACGGCGCCTA TCTGGCGCAA
TGGTTGCTGG AAAAAGACTA TACGGTCTAT GGCCTCATCG CCCGCCGCGG CACCGATACC
ACCGGCCGGT TGCACGAACT GGGCATCGCC GATCAGGTGC GCCTGCTGGA CGGCGACCTC
ATCGATCTGT CCTCCATGAT CCGCGCCATG GAAAAGTCCC AGGCGACGGA AGTCTATAAC
CTGGGCGCCC AGAGCTTTGT GGCCACCTCC TGGGATCAAC CGATTCTGAC CGCCGAAGTC
ACCGGCACCT CTGTGGTCAA GATGCTGGAG GCCATCCGCA TCGTCAACCC CCAGGCGCGT
TTCTATCAGG CATCCACCAG CGAGATGTTC GGGCAGATTC AGGAACCGCT CCAGTCCGAA
CGCACGCCCT TTCACCCCCG CAGCCCCTAT GGCGTCGCCA AGCTCTACGG CCACTGGATC
ACCGTCAACT ACCGCGAGAG CTTCGGCCTG CATGCCTCCA GCGGCATCCT CTTCAACCAC
GAATCCCCCC TGCGCGGCAC CGAGTTCGTC ACCCGCAAGA TCACCCTGGC GCTGGCGCGC
ATCCGTCAGG GCGTACAGGA CGTGCTGGAG CTGGGCAATC TCGACAGCAA ACGCGACTGG
GGTTATGCGG GCGACTATGT GCGCGCCATG TGGCTGATGC TGCAGCAGGA GCAGCCCGAT
GATTATGTCA TCGCTACCGG CGAGACCTGG ACGGTGCGCA CCTTTGTCGA GAAGGCCGCC
GCCCATGCGG GATTCGATCT GGAGTGGCGG GGCGAGGCGG AAAAGACCCA GGGCGTCGAT
CGCCGGAGCG GCAAGGTCAT CGTCCGCGTC AACCCGGCCT TCTACCGCCC CGCCGAGGTG
GACATCCTCA TCGGTGATCC CGGCAAGGCA CAGCAGAAGC TGGGCTGGAA GCGCGAAGTC
GGCTTCGATG CCCTGGTGCG GATGATGGCC GAAGCCGACC TGCGGCGCGT CGCTGGGTAG
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| Protein sequence | MTKHALITGI TGQDGAYLAQ WLLEKDYTVY GLIARRGTDT TGRLHELGIA DQVRLLDGDL
IDLSSMIRAM EKSQATEVYN LGAQSFVATS WDQPILTAEV TGTSVVKMLE AIRIVNPQAR
FYQASTSEMF GQIQEPLQSE RTPFHPRSPY GVAKLYGHWI TVNYRESFGL HASSGILFNH
ESPLRGTEFV TRKITLALAR IRQGVQDVLE LGNLDSKRDW GYAGDYVRAM WLMLQQEQPD
DYVIATGETW TVRTFVEKAA AHAGFDLEWR GEAEKTQGVD RRSGKVIVRV NPAFYRPAEV
DILIGDPGKA QQKLGWKREV GFDALVRMMA EADLRRVAG
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