Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2975 |
Symbol | |
ID | 7135651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2665813 |
End bp | 2666985 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643531326 |
Product | capsule polysaccharide export protein, BexD/CtrA/VexA family |
Protein accession | YP_002427342 |
Protein GI | 218665440 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTCAA AGAGTGTGCT CCAATTGGCG ATGGCCTTCG CCATGATGGG GCTCTGCGGC TGCGCCTCTT ACCTCCCTTA TTCGGGTCCT CGCACCTCGT CGGTCGTGGA TGCCGGGGAG AACAAGGCCT TGGCTGGCAT CCAGGTGGTG GATGTCAATT ATGCCCTGGC GCGTCTCATT AAGGATAAGC TGGAGAAACC CGCCTTTTCG TCCCTGGCGG ACTTGGCCAA CGCGAACCCC AATCTGTATA CTGTGGGACC AGGGGATACC CTGCAGGTGT ACATCTGGGA GGCGCCTCCG GCCATGCTCT TTACCTCCGT CCCTAGTTCC ATGGCTACGC CATCGGGTTC GATGATGACC GCGATCCCTG AGCAAATAGT GAGCAGTGAC GGTGATATCG CCATTCCTTT TGCGGGTGAG ATTTCCTGTT CCGGTCGGAC ACTGACTCAG ATCGAGGCGG AAATCCGGCA AAAACTGCGG GGTCAAGCCA ACGACCCGCA GGTGGTGGTG AGTTTGGTCA ACAATTATTC ACGGAGTGTT ACCGTCGTGG GCAACGTGAC GCGTAGCACG TCGGTACCCC TGGTGCCGGG CGGTGTGAAT GTGCTCCAGG CCCTGGCGGC GGCGGGCGGG GTGGACAAGC CGGTAAACAA AGTCACCATG CAGATTTCCC GCGCCGGAAA GGTGGTGGAT ATGCCTCTGG AAAGCGTCAT CAAAAATCCC CAGGAAAATA TCTCATTACA TGCGGGGGAC ATACTCACGG CCCTGTATGA ACCCCTGCAT GTCACCATCC TGGGAGCTAC GACGCAGAGC CGGGAGCTGG ACTTTGAAGC GACGGGCGTC AGCCTGTCCC AGGCCTTGGC CCGCGCGGGC GGTCTGAATG GTCATGAGGC GGACGCGAAA GGGGTCTTCG TCTTCCGCTT TGAAAAACCC TCCCTGCTGC CCCAATGGCC GCATCCCGTG CAGGTGGCGC AGAACGGCCT GGTCCCGGTG GTGTTCCGCT TTGATCTCAG TAATCCGGCT ACGTTGTTCG CGGCGCAGAC CTTCCCCATC CAGAATCATG ACCTGATTTA TGTGGGTACC GCCCCGATCA CGGAACTTCA GAAGTTTCTG GGCATGGTTG TGCAGATCGT CTACCCCATT CAGGGTCTGA CCAATGCAGG GGTGCTCCCT TGA
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Protein sequence | MRSKSVLQLA MAFAMMGLCG CASYLPYSGP RTSSVVDAGE NKALAGIQVV DVNYALARLI KDKLEKPAFS SLADLANANP NLYTVGPGDT LQVYIWEAPP AMLFTSVPSS MATPSGSMMT AIPEQIVSSD GDIAIPFAGE ISCSGRTLTQ IEAEIRQKLR GQANDPQVVV SLVNNYSRSV TVVGNVTRST SVPLVPGGVN VLQALAAAGG VDKPVNKVTM QISRAGKVVD MPLESVIKNP QENISLHAGD ILTALYEPLH VTILGATTQS RELDFEATGV SLSQALARAG GLNGHEADAK GVFVFRFEKP SLLPQWPHPV QVAQNGLVPV VFRFDLSNPA TLFAAQTFPI QNHDLIYVGT APITELQKFL GMVVQIVYPI QGLTNAGVLP
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