Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2836 |
Symbol | glgB |
ID | 7134180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2518511 |
End bp | 2520709 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643531189 |
Product | 1,4-alpha-glucan branching enzyme |
Protein accession | YP_002427206 |
Protein GI | 218667749 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGC GTGGCAGTAC GGGGGGCGGT CCGTCCGGCG ACAGTGAAGA CGGTTTGGCC ATTCGTGAGG CTCGTCATCA CGACCCCTTC GCCTGGCTGG GCCAGCATAC GGTTGATGGG CGGAGCGTGC AGCGGGCCTT TCTGCCCGGA GCCTTCGGCG TGGAGATACA GACGCCAGCG GGATGGGTGG TCATGGAACA GAGCCATCCG GCCGGCATTT TCACCCATCA GGGCGAGGTC ATACCGGTGC CTTACCGCCT GCGCTGGGAG GATCGGCACG GATTCCACGA ACGCCATGAC CCTTATGTCT TCGGCCCGGT GTTGGGGGAT GTGGAGGTGT ACCTCTTCGG CGAGGGGCGC CTCTATGAAG CCTATCGTCA CCTCGGTGCG CACCGTCGCC ATCACGAGGG AGTGGATGGG GTGTTATTCG CCGTATGGGC GCCCAATGCG GGACGGGTCA GTGTCGTCGG TGATTTCAAT GATTGGGACG GCCGCGCCCA CCCCATGCGC GCGCGTGGCC AGAGCGGCAT CTGGGAACTG TTCATCCCGG ACCTCGCCAC TGGCGAAATC TACAAATTCG AGATCCGTCA CCGCGATTCC GGGGCGGTAT TCGTCAAGAC CGACCCCTAC GCCCATGCCT TTGAGCTCAG ACCGAGTACG GCGGCACGCG TGGTGGAAAA TGACCACGTC TGGGAGGATC AGGACTGGAT GGCGGCTCGG ACCGGTCAGG ACTGGCAGCA CGCCCCCATG AACATCTACG AAGTGCATCT CGGTTCGTGG CAGCGTGATG CGGCGGGCCA TTTCCTCAGT TACGCGGCGC TGGCGGAAAG TCTGGTGTCC TACTGCAAGG ATATGGGTTA TACCCACATC GAACTGATGC CGGTGATGGA GCACCCTCTG GACGAATCCT GGGGCTATCA GGTGAGCGGC TATTTTGCAC CCACCAGCCG CTTCGGTACG CCCGACGGCT TCCGCGCCTT TGTGGATCAG TTTCATCAGG CGGGCATCGG TGTGCTTCTG GACTGGGTGC CGGGGCATTT CCCCCGGGAT GACTGGGGGC TGGCGCGCTT CGATGGCACC CCGTTGTATG AACATGCCGA TCCGCGCGAG GGCGAGCACA GCGACTGGGG CACTTATATT TTCAACTTCG GACGCAACGA GGTGCGTGGT TTTCTGCTGG CCAATGCCTG CTACTGGGCG GACAGTTTCC ATATCGACGG GTTGCGCGTG GATGCGGTGG CGTCCCTGCT CTACCGCGAT TATTCGCGTC AGGAGGGCGA GTGGATTCCC AATCAGTACG GTGGCCGGGA AAATCTCGAG GCCATTGATT TCCTGCGCGA GATGAATGTG ATCCTCAATG AGCGTCATCC GGGCATCCTC ACCATTGCCG AAGAGTCCAC GTCCTGGCCG ATGGTCTCCC GCCCCACCTA TGTGGGCGGC CTGGGTTTTT CCATGAAGTG GAATATGGGC TGGATGAACG ATACCCTGGC CTACCTGGAA CAGGACCCGG TCTACCGGCG CTTTCACCAG AACGACCTGA CCTTCAGCCA GCTTTACGCT TATTCGGAAA ACTTCGTGCT GCCCTTGTCC CATGACGAAG TGGTGCATGG CAAGCGTTCA TTGCTGGACA AAATGCCGGG GGATGCCTGG CAGCGTTTTG CCAACCTGCG CCTGCTGTTC AGCTACCAGT TTGCGCATCC CGGCAAGAAA CTGAATTTTA TGGGCAACGA GTTCGGCCAG GGACGGGAGT GGGATTGCGG GCAGGCCCTG GACTGGGACC TGCTGCATTG GGACTGGCAT CAGGGCATTC AGCGGTTGAG CCGAGATCTG GCCCGTCTCT ACCGGGATAT TCCGGCCTTG TATGCGCAGG ATTTTCAGGG CGAGGGCTTC TCCTGGGTGG ATTGCCATGA CGCCGATCAG TCGGTGTTGA GTTTTCTGCG CTGGGACCGG GACGGCGGTT TCGTGCTGGC GGTGTTCAAT TTTACGCCGG TGCCTCGGCG CAATTATCGT CTGGGGGTGC CGGCTGCGGG TCGGTACCGG GAGATCTTCA ACAGCGACGC GGGCGCCTAT CACGGCAGCA ATGTGGGCAA TCTGCCGCAG CAGGCCCAGG ATCAGTCGTG GATGGGTCTG TCCCATTCGC TGGAACTGGT CCTGCCGCCC CTGGGCGCGA TTTATCTACA GCTTACCGGA GTAGGCTGA
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Protein sequence | MQKRGSTGGG PSGDSEDGLA IREARHHDPF AWLGQHTVDG RSVQRAFLPG AFGVEIQTPA GWVVMEQSHP AGIFTHQGEV IPVPYRLRWE DRHGFHERHD PYVFGPVLGD VEVYLFGEGR LYEAYRHLGA HRRHHEGVDG VLFAVWAPNA GRVSVVGDFN DWDGRAHPMR ARGQSGIWEL FIPDLATGEI YKFEIRHRDS GAVFVKTDPY AHAFELRPST AARVVENDHV WEDQDWMAAR TGQDWQHAPM NIYEVHLGSW QRDAAGHFLS YAALAESLVS YCKDMGYTHI ELMPVMEHPL DESWGYQVSG YFAPTSRFGT PDGFRAFVDQ FHQAGIGVLL DWVPGHFPRD DWGLARFDGT PLYEHADPRE GEHSDWGTYI FNFGRNEVRG FLLANACYWA DSFHIDGLRV DAVASLLYRD YSRQEGEWIP NQYGGRENLE AIDFLREMNV ILNERHPGIL TIAEESTSWP MVSRPTYVGG LGFSMKWNMG WMNDTLAYLE QDPVYRRFHQ NDLTFSQLYA YSENFVLPLS HDEVVHGKRS LLDKMPGDAW QRFANLRLLF SYQFAHPGKK LNFMGNEFGQ GREWDCGQAL DWDLLHWDWH QGIQRLSRDL ARLYRDIPAL YAQDFQGEGF SWVDCHDADQ SVLSFLRWDR DGGFVLAVFN FTPVPRRNYR LGVPAAGRYR EIFNSDAGAY HGSNVGNLPQ QAQDQSWMGL SHSLELVLPP LGAIYLQLTG VG
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