Gene AFE_2760 details

Gene Information

• Locus tag: AFE_2760
• Symbol: prfA
• ID: 7135374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2455230
• End bp: 2456327
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643531115
• Product: peptide chain release factor 1
• Protein accession: YP_002427134
• Protein GI: 218665453
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTCA GTCCGCGGTT GCAGAGCCAA CTCGAGCAGT TGGCCTTTCG TTTTGACGAA 
TTGAGTCAGT TGCTGGCGAG TCCTGGTGCG GCCGGCGATA CCCAGCGTTT TCAGAGCCTC 
TCCAAAGAGT TGGGCGAGAT TGGTCCGGTC CTGGAACTGC TCCGCCGTCA TCAGCAGCGG 
CAGCGGGATC GGGACGAGGG CGGGCGTATG CTGCTGGAAG AACAGGATGC GGAACTGCGT 
GCGCTGGCCA GCGAAGAGGT TGCGGCGGCC GAGGCAGAAC TCGACCAGAT CGAAGCAGCC 
CTGCGGATAC GCCTATTGCC CAAGGATCCC AATGATGATC GTAGTGTCTT TTTGGAAATT 
CGGGCAGGGA CCGGTGGTGA GGAGGCCGCG CTCTTCGCGG GAGTGTTGGC CCGGATGTAT 
ACCCGTTATG CCGAGAGTAA GGGCTTTGGG GTAGTCATTC TTTCCGCCTC CGATTCGGAA 
CGGGGCGGCT ACAAGGAGGT CGTGCTGGAA ATCAGTGGAC GTGGCGCTTA CTCCTGCCTG 
AAATTCGAAT CGGGTGGACA TCGGGTGCAG CGGGTGCCCG AGACCGAGAC GCAGGGCCGT 
ATCCATACTT CCGCCTGTAC GGTGGCGGTG CTGCCCGAGG TGGATACGGT GAGCGAGATC 
ACCATCAACC CCGCCGACCT GCGCATCGAT ACCTATCGTG CCAGTGGCGC GGGGGGGCAG 
CACATCAATA AAACCGACTC CGCCATCCGT ATCACCCATG TCCCCTCCGG CATGGTGGTG 
ACCTGCCAGG AAGACCGCTC CCAGCACAAG AACCGGGCGC GGGCCATGGC GCTGCTGCAG 
GCCCGTCTGC TGGAACAGGA GCAGGAGAAG CAGCAGAGTG CGGCGGCGCA GACCCGACGT 
CTGCTGGTGG GTTCCGGAGA TCGCTCCGAA CGCATCCGCA CCTACAATTT CCCCCAGGGG 
CGGATCACCG ATCATCGCAT CAATCTCACG CTGTACCGGC TGGAAGCGGT GCTGGAGGGT 
GATCTCGATG CCGTTATCGA ACCGCTGATC AAGGAATATC AAGCCGATCT CCTGCAGCAT 
ATGGGTGATG ACCTCTGA 

 

Protein sequence

MSLSPRLQSQ LEQLAFRFDE LSQLLASPGA AGDTQRFQSL SKELGEIGPV LELLRRHQQR 
QRDRDEGGRM LLEEQDAELR ALASEEVAAA EAELDQIEAA LRIRLLPKDP NDDRSVFLEI 
RAGTGGEEAA LFAGVLARMY TRYAESKGFG VVILSASDSE RGGYKEVVLE ISGRGAYSCL 
KFESGGHRVQ RVPETETQGR IHTSACTVAV LPEVDTVSEI TINPADLRID TYRASGAGGQ 
HINKTDSAIR ITHVPSGMVV TCQEDRSQHK NRARAMALLQ ARLLEQEQEK QQSAAAQTRR 
LLVGSGDRSE RIRTYNFPQG RITDHRINLT LYRLEAVLEG DLDAVIEPLI KEYQADLLQH 
MGDDL