| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2741 |
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| Symbol | omp40 |
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| ID | 7134114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2440045 |
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| End bp | 2441259 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643531096 |
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| Product | major outer membrane protein 40 |
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| Protein accession | YP_002427116 |
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| Protein GI | 218665555 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0105158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA ATCTCGTAGC TTTGGCCGTC GCAGCGGCTT TTGTGGTTCC CGGCGTTGCT
TTCGCCGCAG ACACTTCCAA CGCGGATACC GGCCCTGTTG TGTTCGGTTA CGCCCAGATC
ACCGGCGCCC AGCAGTTTGG CACCGGCCCC GGCAGTTCCA ATGGCCTCAT TTTTGGTGCC
AACCGCATCC GTCTGGGTTT CAAGGGCGAA GCGGTTCCCG GCGTGACCTA TTACATCCAG
GGCGCTTATG ACGAGGCAGG TCTCGGCAAC GCAAACGCTC TGTTCCCGAA AACCGCTGGC
CTGCTCAACA ACGGCCTCGG CGGCAATATC GGAGGTGGCG CTCAGGCACA GTTGATGGAT
GCCTGGATCA ACTTTGCGCC GGTGCCCTTC GCCCAGTTGC AGGTCGGCAA GTTCAAGACC
CCGGAAGGTC TGGAATATAC CGGCACCGCG GGTAATGAAC TGATGTTCAT CTATCGCAAC
ATGAACCAGT CCCTGCTGCC CGGACGTTCC GCCGGCGCCA TGCTCCATGC CGACGACGTG
ATGGGTACGG GCATCGGCTA TGCCGTGGGT ATGTTTGACA ACACTTCGTT GGATCCCGCT
ACGGTATATA GCAATATCAA TACCTTTGGC GGTGGTCAGA GCGGACTCCT CAACGGCAAC
GGCAAGTACA TCGTTTCCGG CATGTTGAAG TACAGCATGG GCCCGCTGCT GACCGCGGAA
GTGAGCGGCA GTATGGGTAC AGAGAACAAT CGTGGCACCG ACAACCTGAC CAGCTGGAAC
GTTGGCGTCC AGGGCGGGAT GATGGGCATC CACTACGGTG CGGGATACAC CAAGGCTTCC
GGCGTGTCCG CATGGCCTTA CCTGAATATC AACCCGCTGT ATACCCCGGT CACTTATTCT
GCCACCGATT GGCATGCGGA ACTCGCCGCC AACCTGTACG AGATGACGCT GACCCCCGAC
TGGCTGGACG TCGAGGCTGC CGCGCGGTAT GACCAGTATG CGGTCCATGG TCAGGGCACC
TTGAGCAATA CCACCGTGGG CTTGAACTAC TATGTCAATC CCAACAACCC CCACGCCGCC
GAAGTGCAGT TGAACTACAT CCTGGCGACC CGTGGCGGTT CCATCGACAA CACCTATCCT
GGCCCCAACG GGCTTGCCCC CATCAACGGT GTGGCTTACA ACACCCTGAT GTTGCAGTTC
CAGGCCGGCT TCTAA
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| Protein sequence | MKKNLVALAV AAAFVVPGVA FAADTSNADT GPVVFGYAQI TGAQQFGTGP GSSNGLIFGA
NRIRLGFKGE AVPGVTYYIQ GAYDEAGLGN ANALFPKTAG LLNNGLGGNI GGGAQAQLMD
AWINFAPVPF AQLQVGKFKT PEGLEYTGTA GNELMFIYRN MNQSLLPGRS AGAMLHADDV
MGTGIGYAVG MFDNTSLDPA TVYSNINTFG GGQSGLLNGN GKYIVSGMLK YSMGPLLTAE
VSGSMGTENN RGTDNLTSWN VGVQGGMMGI HYGAGYTKAS GVSAWPYLNI NPLYTPVTYS
ATDWHAELAA NLYEMTLTPD WLDVEAAARY DQYAVHGQGT LSNTTVGLNY YVNPNNPHAA
EVQLNYILAT RGGSIDNTYP GPNGLAPING VAYNTLMLQF QAGF
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