Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2684 |
Symbol | |
ID | 7134547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2387677 |
End bp | 2389797 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643531040 |
Product | hemagluttinin family protein |
Protein accession | YP_002427061 |
Protein GI | 218666423 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGCCC TCACCCAAAC CCTGGGACTC GGTTCGGCGG TCACCCAGTA CGGTGACAGC AACAATATCG CATCGGGACC CGGCAGTGCC GCCGGTACCA ATGATACGGC CGTGGGCGTG AATGCGACGT CCACCGGCAC CAACTCCGTG GCCCTCGGCT ACAACAGCAG CGATGGTGGG CAAAACAACG TCGTAGCGGT GGGTAGCGCC ACCCAGCAGC GCAAGATCAT CAACGTGGCG CCGGGCACCC TGAGCCAGAC CAGCACGGAT GCGGTCAACG GCAGCCAGTT GTATGCCACA GACCAACAGC AACTGACCAA TACCAGCAAT ATCAGCAATC TCCAGAATCA GCAGAAGATC GATCAAACCA ATATTTCCCA CTTGCAATCG ACGGTCAGCA ATATCAGCAA CCTGACCTCG GTGGCCGGTG ACCTCACCGC CATCAAGCAG CAGCAGCAGA CGGATATGAG CAATATTGCC GTCAACACTT CCGACATCAG CAACCTCAAG GGTCAGCAGG GCACCGACGT CACCAACATC AGCAACCTGC AGAAACAGCA GGCCACCGAC GTCAGCAATA TCGCCAACAA TACCAGCAAC ATTGCCAGCA ATACCTCCAA TATTGCCGTC AACACTTCCG ACATCAGCAA CCTCAAGGGT CAGCAGGGCA CCGACGTCAC CAACATCAGC AACCTGCAGA AACAGCAGGC CACCGACGTC AGCAACATCG CCAACAATAC CAGCAACATC AGCAATCTGA GCAACGTGGT CGGGGGCTTG ACGTCAACGG CAGTCGATCT CACCAAAATC AAAAAACAGC AAGCCACCGA TGTCACCAAT ATCGCCAGCA ACACCAGCAA CATCGCCAGC AATACCTCGG ACATCAGCAA CCTGAAAAAT CAGCAGGGCA CCGACGTCAC CAACATCAGC AACCTGCAGA AACAACAGGC CACCGACGTC AGCAACATCG CCGGCAACAC CACCAATATC GCCAGCAACA CCTCCGACAT CAGCAACCTG AAAAATCAGC AGGGCACCGA CGTCACCAAC ATCAGCAACC TGCAGAAACA ACAGGCCACC GACGTCAGCA ACATCGCCGG CAACACCACC AATATCGCCA GCAACACCTC CGACATCAGC AACCTGAAAA ATCAGCAGGG CACCGACGTC ACCAATATCG CCAGCAACAC CAAAGACATC AAGAACATCA AGACGCAACA GGCTACCGAC GTCAGCAACA TCGCCAGTAA CACCACCAAT ATCGCCAGCA ACACCTCCGA CATCAGCAAC CTGAAAACCC AGCAGGGTAC CGACGTCACC AATATCGCCA GCAACACCAA CGACATCAAG AACGTCAAGA CGCAACAGGC TACCGACGTC AGCAACATCG CCATGAACAC CAGCAATATC AGCCAGTTGC AAACCATCGT CAACGGCAAA GTCGCCACCT GTCAGGTCGT CAACGGCGGC CTGCAGTGCA CCTACGCCCA GGCCAAGGGT ACGAACGACG TGGCAGCAGG AAACGGGGCG CTCGCCAACG GCACCAGCAG TATCGCCATC GGTACCAACG CCACGGCAAC CTACAACGGC GCGGTAGCCA TCGGTGATGG TGCCCGGGCG GTGGCCGATC CCGCGACAGC CATTGGTGCC AACGCTCAGG CCAATGCCAA CAATAGTACG GCTATCGGTG CCAACAGCAC GGCCAACGGG ATCAATTCCG TTGCCCTGGG ACAAGGTTCC ACCGCCAATC GCGCCAATTC CGTTTCCGTG GGCAACGCCT CTACCGGGCT GACGCGACAG ATCACCAATG TGGCCCCCGG CACCACACCC AATGATGTGG CCACCGTCGG TCAGTTGCAG GGTGCCGTCG GGCAGGCGCA GCATTACGCG GCCCAAGTGG GCTCCGTCAA TGCCGCAGCC CTGAACGCCG CCGCATCCGC CGCATCCGGT CAGGGACCCA ACACGGTGGC CGGCGGTTAT GGTGAGTACG ATGGACAGAG CGCATTCGCG TTTACATATC AGCACCGCTT CAACTGCAAC TGGCAGGCGC TGTTGACGGT GGGCAGCAAC GGTTCGGGCA AAAATACCGA AGTGGGCGCG GGAGCGTCCT ACAGTTGGTA A
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Protein sequence | MAALTQTLGL GSAVTQYGDS NNIASGPGSA AGTNDTAVGV NATSTGTNSV ALGYNSSDGG QNNVVAVGSA TQQRKIINVA PGTLSQTSTD AVNGSQLYAT DQQQLTNTSN ISNLQNQQKI DQTNISHLQS TVSNISNLTS VAGDLTAIKQ QQQTDMSNIA VNTSDISNLK GQQGTDVTNI SNLQKQQATD VSNIANNTSN IASNTSNIAV NTSDISNLKG QQGTDVTNIS NLQKQQATDV SNIANNTSNI SNLSNVVGGL TSTAVDLTKI KKQQATDVTN IASNTSNIAS NTSDISNLKN QQGTDVTNIS NLQKQQATDV SNIAGNTTNI ASNTSDISNL KNQQGTDVTN ISNLQKQQAT DVSNIAGNTT NIASNTSDIS NLKNQQGTDV TNIASNTKDI KNIKTQQATD VSNIASNTTN IASNTSDISN LKTQQGTDVT NIASNTNDIK NVKTQQATDV SNIAMNTSNI SQLQTIVNGK VATCQVVNGG LQCTYAQAKG TNDVAAGNGA LANGTSSIAI GTNATATYNG AVAIGDGARA VADPATAIGA NAQANANNST AIGANSTANG INSVALGQGS TANRANSVSV GNASTGLTRQ ITNVAPGTTP NDVATVGQLQ GAVGQAQHYA AQVGSVNAAA LNAAASAASG QGPNTVAGGY GEYDGQSAFA FTYQHRFNCN WQALLTVGSN GSGKNTEVGA GASYSW
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