| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2381 |
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| Symbol | |
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| ID | 7136690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2127023 |
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| End bp | 2130121 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530746 |
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| Product | type I restriction-modification system, R subunit |
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| Protein accession | YP_002426770 |
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| Protein GI | 218667282 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGG AAGGCCGCAC CCGGAAACAA ATCGACGCCC CAGACACCTA CAGTCGGCCC
GCTGATAGTC CGAGTTTCGC CGTCCGCGAG GACACCATCG AATACGGCTT CATCGGCACC
CTGCAAAACC TCAAGTACGA ATATCGCCCC GACATCCGCG ACCGCGCCGC GCTGGAGGCC
AATTTCCGCC AGCACTTCGA AGCGCTCAAC CGCGTCCGCC TCACCGATGC CGAGTTCGCC
CGCCTGCTGG ATGAGATCGT CACCCCGGAT GTTTTTACCG CCGCCAAGAC CCTGCGCAGC
ATCAATGCCT TCACCCGCGA CGACGGCACG CCGCTGAACT ACAGCCTCGT CAACCTCAAG
GACTGGTGCA AAAACACCTT CGAGGTCATC CACCAGTTGC GCATCAATAC CGACTACAGC
CACCACCGCT ACGACGTCAT CCTGCTCATC AACGGTGTGC CCTGCGTGCA GATCGAGCTG
AAAACCCTCG GCGTCCATCC GCGCCGGGCC ATGGAGCAGA TCGTCGAATA CAAGCACGAC
CCCGGCAACG GCTACACCCG GACGCTGCTC TGCTTCATGC AGCTCTTCAT CGTCAGCAAC
CGCGACCAGA CTTACTACTT CGCCAACAAC AACGCCCGCC ATTTCGCCTT CAACGCCGAC
GAGCGCTTTT TGCCCGTCTA TGAGTTCGCG GACGAGGACA ATAGCAAGAT CAGACAGCTC
GACGCCTTCG CCGAGCGCTT CCTGAAAAAG TGTAACCTCG GCCAGACCCT CAGCCGCTAC
ATGGTGCTGC TGGCGGGCGA GCAAAAGCTC ATGATGATGC GACCCTATCA GGTCTATGCC
GTGCAGCACA TGGTCAAGTG CATCGATGAA GACAACGGCA ACGGCTACAT CTGGCACACC
ACCGGCAGCG GCAAGACGCT CACCTCCTTC AAGGCCGCCA CCCTGCTCAA GGAGAACGAG
CACATCCATA AATGCGTGTT CGTTGTCGAC CGCAAGGACC TCGACCGCCA GACGCGGGAG
GAATTCAACC GCTTCCAGGA AGGCTGTGTC GAAGAAAACA CCCACACCGG CGCCCTCGTG
CGCCGCCTGC TGTCCGAGGA CTACGCCGAC AAGGTCATCG TCACCACCAT CCAGAAGCTC
GGCCTCGCGC TCGACGAAAC GAGCCGCCGC AACAAGCAAC GCAGCAAAAA CGGCCAGGCC
ACCTACAAGG AGCAGCTCGA AGCACTGCAG GACGAGCGCA TCGTCTTCAT CTTCGACGAA
TGCCACCGCT CGCAGTTCGG TGAGAACCAC AAGGCCATCA AAGCCTTCTT CCCCCGCGCC
CAACTCTTCG GCTTCACCGG CACGCCCATC TTCGAGGCCA ATGCCAGCCT GCAGAAGATC
GAGGACAGCA CGGCCTCCAT GCGCACCACG GCAGACCTCT TCCAGAAACA GCTGCACGCC
TACACCATCA CCCACGCCAT CGAAGACGGC AATGTGCTGC GCTTCCATGT CGATTACTTC
AAGCCGGAAG GAAAGAACCC ACCCAAACCC GGCGAACCCA TCGCCAAGCG CGCGGTCATC
GAAGCCATCC TCGCCAAGCA CGATGCCGCC ACCGGCGGGC GCCGCTTCAA CGCCCTCTTT
GCCACCGCAT CCATCAACGA TGCCATCGAA TACCACGCGC TGTTCAAGAC CATGCAAGCC
GAGAAACTGG CCGCCGATCC CGAGTTCAAG CCGCTGAATA TCGCCTGCGT CTTCTCTCCG
CCTGCGCAGC TCGCGGAGAA TCCCGAAAGC AAAAAGGACA TCGACCAGCT CTCCGAAGAC
CTCCCGCAAG AGCAGGAAGA CAACAAGGTC GAGCCAGAAG CGAAGAAGCA GGCGCTTGAA
GGCATCCTCG CCGACTACAA CGCCCGCTAC GGCACCAACC ATCGCCTGAG CGAATTCGAT
CTTTACTACC AGGATGTGCA AAAGCGGATC AAAGACCAGC AGTGGCCGAA TGCCGACTAC
CCCCCGGCGC AGAAAATCGA CATCACTATC GTCGTGGACA TGCTGCTCAC CGGCTTCGAT
TCCAAGTTCC TGAACACGCT CTACGTGGAC AAGAACCTCA AGCACCACGG CCTGATCCAG
GCCTTCTCGC GCACCAACCG CGTGCTCAAC GCCACCAAGC CCTACGGCAA CATCCTCGAC
TTCCGCCAGC AGCAGGATGC CGTCGATGCC GCCATCGCGC TGTTCTCCGG CGAAAAGACC
GGCGAGCAGG CGCGCGAAAT CTGGCTGGTG GAAAAGGCGC CCGTGGTCAT CCAGAAACTG
GAGGCCGCCG TGCAAAAGCT CGACGCCTTC ATGCAGTCCC AGGGGCTGGA TTGCACGCCC
TCCACCGTGG CCAACCTGAA AGGCGATGCC GCCAAGACCG TTTTCATCGA GCGCTTCAAG
GAAGTGCAGC GGCTCAAGAC CCAGCTCGAC CAATACACCG ACCTCACCGG GGAAAACAAA
GCCGCCATCG AGCAGGTGCT GCCCGAAGAA ACCCTGCGCG GCTTCAAGGG CCAGTATCTG
GACACCGCCA AAAAGCTCCG CGACGGGCGC AACAAGCCGG ACAAGCCCGG CGCCGACAAG
CCTGCCGATC AGCTCGACTT CGAGTTCGTC CTCTTCGCCT CCGCCGTCAT TGATTACGAC
TACATCATGA AGCTGATGAC CAGCTTCTCG GCCAAAGAGC CGGGCAAGGC CAAGATGACC
CGCGAACAAC TCATCGGCCT CATCAGCAGT GACGCCAAGT TCATCAACGA GCGCGACGAC
ATCGCCGAAT ATATCGGCAC GCTCCAGGCC GGCGAGGGGC TGAGTGAAAC CGCCATCCGC
GACGGCTACA CCCGCTTCAA GGCGGAGAAG AACGCCCAGG AACTCGCCAC CATTGCCGCA
AAGCACAATC TGGCCACCGC CGCCCTGCAA AGCTTCGTGG ACGGCATTTT TGAGCGCATG
ATCTTCGACG GCGAACGCTT GAGCGACCTC ATGGCCCCGC TCGATCTGGG CTGGAAAGCC
CGCAGCCAGG CCGAAATCGC GCTGATGGAA GATTTGTATC CGCTGCTGAC CCAACGCGCC
GGGGGCCGCG ATATTTCAGG GCTTAGCGCC TATGAGTGA
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| Protein sequence | MKPEGRTRKQ IDAPDTYSRP ADSPSFAVRE DTIEYGFIGT LQNLKYEYRP DIRDRAALEA
NFRQHFEALN RVRLTDAEFA RLLDEIVTPD VFTAAKTLRS INAFTRDDGT PLNYSLVNLK
DWCKNTFEVI HQLRINTDYS HHRYDVILLI NGVPCVQIEL KTLGVHPRRA MEQIVEYKHD
PGNGYTRTLL CFMQLFIVSN RDQTYYFANN NARHFAFNAD ERFLPVYEFA DEDNSKIRQL
DAFAERFLKK CNLGQTLSRY MVLLAGEQKL MMMRPYQVYA VQHMVKCIDE DNGNGYIWHT
TGSGKTLTSF KAATLLKENE HIHKCVFVVD RKDLDRQTRE EFNRFQEGCV EENTHTGALV
RRLLSEDYAD KVIVTTIQKL GLALDETSRR NKQRSKNGQA TYKEQLEALQ DERIVFIFDE
CHRSQFGENH KAIKAFFPRA QLFGFTGTPI FEANASLQKI EDSTASMRTT ADLFQKQLHA
YTITHAIEDG NVLRFHVDYF KPEGKNPPKP GEPIAKRAVI EAILAKHDAA TGGRRFNALF
ATASINDAIE YHALFKTMQA EKLAADPEFK PLNIACVFSP PAQLAENPES KKDIDQLSED
LPQEQEDNKV EPEAKKQALE GILADYNARY GTNHRLSEFD LYYQDVQKRI KDQQWPNADY
PPAQKIDITI VVDMLLTGFD SKFLNTLYVD KNLKHHGLIQ AFSRTNRVLN ATKPYGNILD
FRQQQDAVDA AIALFSGEKT GEQAREIWLV EKAPVVIQKL EAAVQKLDAF MQSQGLDCTP
STVANLKGDA AKTVFIERFK EVQRLKTQLD QYTDLTGENK AAIEQVLPEE TLRGFKGQYL
DTAKKLRDGR NKPDKPGADK PADQLDFEFV LFASAVIDYD YIMKLMTSFS AKEPGKAKMT
REQLIGLISS DAKFINERDD IAEYIGTLQA GEGLSETAIR DGYTRFKAEK NAQELATIAA
KHNLATAALQ SFVDGIFERM IFDGERLSDL MAPLDLGWKA RSQAEIALME DLYPLLTQRA
GGRDISGLSA YE
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