| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2228 |
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| Symbol | kdpE |
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| ID | 7136864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1982060 |
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| End bp | 1982803 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643530596 |
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| Product | DNA-binding response regulator KdpE |
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| Protein accession | YP_002426626 |
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| Protein GI | 218667388 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAACA TACACGAAGG CGATCTGGAT ATCCTGTTGG TGGAGGATGA CCCGAGTATT
GGCGGGTTTC TGCAGGCGGC GATGGACCGC GAACCAGGAT ATCGCTTGTA CTGGGAAACC
ACGCTGAAAG ATGCCTGGAG GGCTTGGGAG AAACGACAAA TCCAGGAAGG TCGGCCATTC
GCTTTGGTTC TGCTGGACCT TGGTTTACCG GATGGGGATG GGCAGGGATT GATCCGTCGT
CTACGCGACC ACGGAGGGGA ACAGGCATTG ATCATCGTCA TCTCTGCGCG TGGAGGCGAG
GCTGACAAGG TACAGGCCCT CGATAGCGGC GCCGACGATT ATCTGACCAA GCCGTTTACC
ATTGGCGAGC TGCTCGCGCG CCTGCGCGCG CATTTGCGGC GACGACCAGT AGGTTCATCC
GCCGAATCTT CCCATTGGGT CATTGGCGTC TTGGAGCTGG ATGATCTCAC CCATACCCTT
CGCAAGGGCG GGGTGCCTAT TCCGATGACG CCCAAGGAAT ATCAACTGTT CCACCTTTTT
GTGATGAATC AGGGGCGGAT ATTGTCGTAT CGACGAATTC TCGGCGCAGT GTGGGGAGAG
CACAGTAGCG ATCAGGCCCA CTATGTAAGG TTATATATCA AACGACTGCG GGAGAAGATT
GAGGACGATC CCGGAATGCC ACAATATCTG GTAACCGAAA AAGGGGTTGG GTATCGATTT
GGCAATCCGG AGGTGTCAAA ATGA
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| Protein sequence | MTNIHEGDLD ILLVEDDPSI GGFLQAAMDR EPGYRLYWET TLKDAWRAWE KRQIQEGRPF
ALVLLDLGLP DGDGQGLIRR LRDHGGEQAL IIVISARGGE ADKVQALDSG ADDYLTKPFT
IGELLARLRA HLRRRPVGSS AESSHWVIGV LELDDLTHTL RKGGVPIPMT PKEYQLFHLF
VMNQGRILSY RRILGAVWGE HSSDQAHYVR LYIKRLREKI EDDPGMPQYL VTEKGVGYRF
GNPEVSK
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