Gene AFE_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2189 
Symbol 
ID7134429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1942226 
End bp1943239 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID643530557 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002426588 
Protein GI218665444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.509627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC GTTACCAGTT GGAAACGCCG GTCACTCTGG ATATCCAGAT GCAGGTGCGG 
GATTTCACCG TCCTGCTCGG TCTATCCGGA GAGGGCAAGA CGATGCTGCT CAAGGCCATC
GCCGGTTTGA TTCCGGCGCG TGGGCATCCC TTCGGTGGCC TTGCTGCCGA GCGGCGCCCC
ATTGGCTATT TGCCCCAGGG TTATGCGCTT TTTCCGCACC TGCGGGCCTG GGAAAACGTC
GCCTTTCCGC TGCCAAGGGG TGCGGGCCGC CGCACGCAGG CTATGGATTT GCTTGCGCGC
GTGGGGCTTG CCGACCTGGC GGAGCGTTAT CGTGCGGCCC TCTCCGGCGG GCAACGTCAG
CGGGTGGCGC TCGCCCGCGC TCTGGCCCGG CGTCCGGAGC TGCTGCTGCT GGACGAGCCT
ACCTCGGCGC TGGACATGGC CACCCGCGAC GAGATTCTGG ACGAACTCAT CCGGGAGGTC
CACGATTTTG GAGTGCCGGT GCTGGCGGTG AGCCACGATC CGCACCTGGC GATGCTCGCA
GATCACATGG CAGTGCTGTT GGGTGGGCGT ATTGTGCAGG AAGGCCCTCC CCGTGCGGTG
TTTGCACGAC CCGCCACTGT GGGAGCGGCG CGTTTGCTGG GGTTTCGTAA TTTCCTGGTG
GGGCGCATTG AGGAGGCAAC GGAAGCCGGA ATGGTGGTGG CTGGATCTGG CTGGCGTCTG
CGTACCGGTT TTCGGTATGG CATGCATCCG GGTATGCCGG TGACCGTGGC CATTCGTTCC
GAGGATCTCG TGCCGGGCGA CGTTTTGGGC GTCCCAGCGC CGAATGCACT GAAATTGAAG
GTCGTGAGCC TTCGGGAGGA GGGTGTTGCC TTGCGCGTCA GAATGGACGG GGCTTGTTCT
TTGGATATGC TGTTATCACG CTTGCAATGC GAAGGCAGGT CTCTGGCGCC AGGCGCCCTA
CTTTGGGTAC AGGTGGCACC AGGGCATGTA CATGTGATGA CCGAAGTAGA GTAG
 
Protein sequence
MEIRYQLETP VTLDIQMQVR DFTVLLGLSG EGKTMLLKAI AGLIPARGHP FGGLAAERRP 
IGYLPQGYAL FPHLRAWENV AFPLPRGAGR RTQAMDLLAR VGLADLAERY RAALSGGQRQ
RVALARALAR RPELLLLDEP TSALDMATRD EILDELIREV HDFGVPVLAV SHDPHLAMLA
DHMAVLLGGR IVQEGPPRAV FARPATVGAA RLLGFRNFLV GRIEEATEAG MVVAGSGWRL
RTGFRYGMHP GMPVTVAIRS EDLVPGDVLG VPAPNALKLK VVSLREEGVA LRVRMDGACS
LDMLLSRLQC EGRSLAPGAL LWVQVAPGHV HVMTEVE