| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2044 |
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| Symbol | |
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| ID | 7137284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1796459 |
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| End bp | 1797469 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643530415 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002426448 |
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| Protein GI | 218665365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.860748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG CGTTTGCCAG GTTCCCGCTG ATGCCGATCG TCCTCTTCCT GTGCGCTTGG
CTGGGCGGCG TGGCCCCTGC CTTTGCCCTC CCGGTGCAGG CGGTGGCGGT GCAACGGACC
CCCTGGTCCC GGGAGGTCCG TGTGCTGGGG ACGGTGGAGA GCATCGGGGA AGTCACCCTG
GCCTCTCCGG TGACGGGCCG GGTATTGGGA CCTTTTCTCC AGTCCGGCAA CGTGGCGGCG
GGCGCAGTGG TGGCGCATAT CGCTCCCCCC GGCCTCCATG CCGGCATCCT CGCCGCCCAG
GCGCGGGTGG CCTATGCCCG CACCCAACTG GAGCGTACTC AAAAGCTCTT TCGGGACGGG
GTGATGGCAC AGCAGAATGT GGACCAGGCC GGCTTGGTGC TGGCCGAGGC GCGGTCAGCC
CTCCGGGCGC TGCAGGCCCA GTCTGGAGAT CAGGTGCTGA CGGCCCCCTT CGCTGGCACT
TTGCACTACC TGGTACCCCC CGGCGCAGTG GTCAATGTGG GCAGCCCCAT CGCCCACTTG
GCCGGACGTG GCGAGCCCTG GGCACGGGCC TATGTGACGC CCGCCCAAAC CCAAGGGTTA
CGGGTGGGGA CAACGGTGGC GATCCGGGCC CAAGGTTGGC AAGGTCAGGG GCTGGTCCGC
TCCGTCGGAC AGAGCGCCCG CCACCTCGGT CTGGTCTCCG TTTATGTCAC CCTCCCCCCG
GACAGCCCCC TCCTGCCCGG GGAATGGCTG CAACTCCTGC TGCCGTCGGC GGGCGGTACC
GCCTTTCGGG TGCCCAGCCT GGCGGTGGTC ATGCGCGGGG CCCGCAGCGA GGTTTTCGTG
GTCCGCCGGG GGCGGGCGGT GGCGGTGGCG GTAGAGGTGG TGCATACCCG GGGTAAGGAT
AGCTGGGTCA CCGGCGCGCT CCGCGCCGGG GAGATGGTGG TGATTTCCGG CAACACGCGC
TTGGACTCGG GTACGCCGGT GGAAATACGA GTATCGGGAT CGCAGCCATG A
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| Protein sequence | MNKAFARFPL MPIVLFLCAW LGGVAPAFAL PVQAVAVQRT PWSREVRVLG TVESIGEVTL
ASPVTGRVLG PFLQSGNVAA GAVVAHIAPP GLHAGILAAQ ARVAYARTQL ERTQKLFRDG
VMAQQNVDQA GLVLAEARSA LRALQAQSGD QVLTAPFAGT LHYLVPPGAV VNVGSPIAHL
AGRGEPWARA YVTPAQTQGL RVGTTVAIRA QGWQGQGLVR SVGQSARHLG LVSVYVTLPP
DSPLLPGEWL QLLLPSAGGT AFRVPSLAVV MRGARSEVFV VRRGRAVAVA VEVVHTRGKD
SWVTGALRAG EMVVISGNTR LDSGTPVEIR VSGSQP
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