Gene AFE_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2006 
Symbol 
ID7136059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1757547 
End bp1758206 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID643530377 
Producttranscriptional regulator, putative 
Protein accessionYP_002426411 
Protein GI218667115 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATTGTC CTAAGTCATT TGCAGAAAAC CGCCCGGAAA TCCTGCGGGC ACTGATTCAG 
TGTTATCCCC TCGCAACATT GGTCAGCATG GGCGGTAATG GTCTGGAGGC GAATCATATT 
CCCTTGTACC TCGTACCTGG TGAAGGACCG CAACCGGTGC TGCAAGGCCA TGTGGCACGC 
GCCAATCCCC TGTGGCGAGA GGCGCCCCCG GACGATGAGG TGCTGGTCAT CTTTCAGGGG 
CCGCAACACT ACATCAGCCC TTCCTGGTAT GCGACCAAGG CGGAAACCGG CGAGGTGGTG 
CCTACTTGGA ACTATGCCGT CGTCCATGCC CACGGGCCGC TGCAGGTCAG GGACGATCCC 
TATTGGGTAC GGCAACAGAT GGTCGCCCTG ACCGCGCAGC AGGAGAACAG TTTCACCCCG 
CCCTGGGAGG TGGGTGATGC GCCTCGGGAT TTTACGGATC GTCTCATCCA GCAGGTAGTG 
GGCATAGAAA TCCCCATCTC CCGCTGGGTG GGCAAGTGGA AGGTCAGCCA GAACCAGCCG 
GTTGGCAACC GTGACAGTGT CGTCGCGCAC CTGGAGCAGC AAAACCAAGC TGGCTCTGAG 
GCCATGGCTG AATATATTCT GGCCAGCCTG AAAGGCGGCA AGAAGGACCA TCCCGGATGA
 
Protein sequence
MYCPKSFAEN RPEILRALIQ CYPLATLVSM GGNGLEANHI PLYLVPGEGP QPVLQGHVAR 
ANPLWREAPP DDEVLVIFQG PQHYISPSWY ATKAETGEVV PTWNYAVVHA HGPLQVRDDP 
YWVRQQMVAL TAQQENSFTP PWEVGDAPRD FTDRLIQQVV GIEIPISRWV GKWKVSQNQP 
VGNRDSVVAH LEQQNQAGSE AMAEYILASL KGGKKDHPG