Gene AFE_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1975 
SymbolispA 
ID7136128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1732723 
End bp1733643 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID643530348 
Productgeranyltranstransferase 
Protein accessionYP_002426382 
Protein GI218665395 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.668358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGG ATGTTGCGGT GAACAACGAA ACTTTTGCGC AGTTCCGGTC ACGCTCGGTA 
CGACGCATTG AGGACGTTCT GGAAACACTG CTGCCCCCGG CGCATCTCCT GCCGGCGCGG
CTGCATGACG CCATGCGTTA TAGTACGCTG GGTGGCGGCA AGCGCGTCCG TCCCCTGCTG
GTATACGCAG CAGGAGCCTG TTTGGGGGTG CCGCTGGAGC TTCTGGACCG CCCTGCAGCG
GCATTGGAAA TGATCCATGC CTATTCTCTA GTGCACGATG ATCTCCCCGC CATGGACAAT
GATGATCTGC GTCGCGGCCT GCCCACCTGT CATCGCGCCT ATGACGAGGC CACGGCCATT
CTTGTCGGCG ACGGTTTGCA GGCGCAGGCC TTCCTGGTAC TTGCTGAACC GGGTTGGGGG
ATGGCGGCGG AACGGCAGGT GCAGATGCTG GCGAGCCTCG CGCAGGCCGC TGGTTCGCGG
GGTATGGTGG GAGGACAGGC CATTGATCTT GCGGCGGTGG GGCATGAATT GGCCTTGCCG
GCGTTGGAGC AAATGCACCT GCACAAAACG GGCATGCTCA TGCGCTGTGC CATCCAGTTG
GCGCTCTGCG CGGCAGGCAT TGATGCGCAG GAGGCCCGTG GTGCCGCGCT GCTGCGTTAC
GCCGACCGTG TCGGGCTCGC CTTTCAGGTG CAGGACGATA TCCTTGACGA AATCGGGGAT
CTGCAGCAAA CCGGAAAAGC GCAGCAGGGC GCGGACCGCA GCCGCAACAA ACCCAGTTTC
ATCACCCTGC TTGGCCTTGC AGAGGCACGA AGCTATGCCC GACGCCTGCT CGACGAGGCT
TTGGATGCCT TGCAATCCTG GCAAGCAGAA GCAGATCATC TTCGCGCCTT GGCGCGCCTC
ATAATAGAGC GGAGCAAATG A
 
Protein sequence
MTLDVAVNNE TFAQFRSRSV RRIEDVLETL LPPAHLLPAR LHDAMRYSTL GGGKRVRPLL 
VYAAGACLGV PLELLDRPAA ALEMIHAYSL VHDDLPAMDN DDLRRGLPTC HRAYDEATAI
LVGDGLQAQA FLVLAEPGWG MAAERQVQML ASLAQAAGSR GMVGGQAIDL AAVGHELALP
ALEQMHLHKT GMLMRCAIQL ALCAAGIDAQ EARGAALLRY ADRVGLAFQV QDDILDEIGD
LQQTGKAQQG ADRSRNKPSF ITLLGLAEAR SYARRLLDEA LDALQSWQAE ADHLRALARL
IIERSK