Gene AFE_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1945 
Symbol 
ID7137197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1695634 
End bp1696392 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content54% 
IMG OID643530318 
Producthypothetical protein 
Protein accessionYP_002426354 
Protein GI218667265 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.474883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAC TCAGCACAGT ATGGTGGGTC CTTCCTGGTT TGTTCCTTGC CGGTATAGGT 
GCCGGATTTA TCAATGTTCT GGCGGGGGCG GGGTCCATGC TGACCCTGCC TGCACTCATT
TTCGTGGGCC TTGATCCAAT CGCCGCAAAC GGCACCAACC GCATCGGCAT CCTTTTGGAA
AACCTCACCG CTGCGCGCAC CTTTTACCAC CATAACCTGG TGGATCTGAA AATGGGAATA
AAGCTGGCGC TATGGACGTT GCCGGGCGCC ATGCTGGGCG CCATTGCCGG TATCCATATC
GGCAATCTCT GGTTTCAGCG TATATTGGTG GTTGTACTGG CAGTTAGCAC TGCCACAATG
TTTCTTCCAA AAATTGTTAC CGGAGAATCC ACACGTCCAG ATGGTGATGC GTCGCCCTGG
CTCTACCCCA CGCTGCTCGC TCTGGGGTTT TACGGCGGCT TTATGCAGCT CGGTATCGGT
TTTCTCTTTA TCTTCGCACT GCGCCATTTT CTCACCAGAG ATCTCGCACA GGTAGCTGCT
TATAAAACCC TAATTATCGC ATTGTACACC TTGCCGACTC TCGTTATCTT TGCCTGGATG
GGGCAGGTTC ACTGGGGTGC GGGCATCGTC ATCGGTATGG GTGGTATGAT TGGCGCGAGA
CTGGCTACGA GGCTTACCAT GAGCCGCCGC GGAAAACTGT GGGTCAAGGT AATAATGGCG
ATAGTCATAC TTGCGATGGC TGCCAGGCTT TGGGTTTGA
 
Protein sequence
MQSLSTVWWV LPGLFLAGIG AGFINVLAGA GSMLTLPALI FVGLDPIAAN GTNRIGILLE 
NLTAARTFYH HNLVDLKMGI KLALWTLPGA MLGAIAGIHI GNLWFQRILV VVLAVSTATM
FLPKIVTGES TRPDGDASPW LYPTLLALGF YGGFMQLGIG FLFIFALRHF LTRDLAQVAA
YKTLIIALYT LPTLVIFAWM GQVHWGAGIV IGMGGMIGAR LATRLTMSRR GKLWVKVIMA
IVILAMAARL WV