Gene AFE_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1915 
Symbol 
ID7137015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1670341 
End bp1670697 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID643530290 
Producttype IV pilus assembly protein PilZ, putative 
Protein accessionYP_002426327 
Protein GI218666799 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3215] Tfp pilus assembly protein PilZ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAC AAGCTGAAGC GGGGGGTGCG GCAAAGGCGC TGTCCGTCGT GTTACGGGAT 
GCCACCGCAG TGCAGCGTTA CTACATGCCC AACATCAAAG GGGGCGGGGT ACTGGTAGAG
ACAGCGAACC TCCTGCCCAT AGGTACCGAG GTGCTGCTCA TGATCACCCT CCCCGACGGT
CAACCGCGTG CACCGGTCAT GGGAAAGGTG GTGTGGGTGA CGCCACCCGA CAACCGTGAG
GGTCGTCCTC CCGCCATCGG TGTCCAGTTT GTCAATGACC GCTCCGGGGT CCTGATCCGG
ATTCAGAACG CGCTGTCCGG CCTGCCAAGG AACGATGGTG AGGTGCTGAG TTTTTAA
 
Protein sequence
MELQAEAGGA AKALSVVLRD ATAVQRYYMP NIKGGGVLVE TANLLPIGTE VLLMITLPDG 
QPRAPVMGKV VWVTPPDNRE GRPPAIGVQF VNDRSGVLIR IQNALSGLPR NDGEVLSF