Gene AFE_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1908 
SymbolfabG 
ID7136340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1664485 
End bp1665234 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID643530284 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002426321 
Protein GI218667860 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.193412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAT CTTTGGAGGG CCAGCTAGCC CTGGTCACAG GTGGCAGCCG CGGCATCGGA 
CGGGAGATCG CGCACGTACT CGGCAGACAG GGTGCGCGGG TCGTTGCCAC GGCAACGACC
TCTGCCGGTG CGGAACGGAT CAGTGCCGAT CTGGCGGCGC AGGGCATCCA CGGCGCCGGG
ATGGCACTGG ACGTGACTGA TGACGCGGCC ATGTCCGCAG TACTCGCGCA GATACAGGCA
TCCCATGGCG CGCCGGCCAT TCTGGTGAAC AATGCGGGAA TCACCCGGGA TCAACTGCTC
CTGCGGATGA AGGATGAGGA TTGGGATGCT GTCATGGCGA CCAATCTGCG CGCGGTATAC
CGCTTGAGCA AGCTATGCGT GCGCGATATG CTCAAAGCCC GTTTTGGCCG TATCATCAAC
ATTACTTCGA TAGTCGGGGT GATGGGGAAT GCCGGGCAGA CGAATTATGC AGCCGCCAAG
GCAGGGGTCG CGGGTTTCAC CCGGGCCATG GCGAGGGAGG TGGCGGCCCG GCAGGTGACC
GTCAATTGTG TGGCACCAGG CTTTATCAGC ACGGACATGA CCGAAGGGCT GAATGAAGCG
CAGCGCGACA CTCTGCTGCA GCAGATTCCT GCGGGAAGGC TGGGGACGGT GGCCGACGTG
GCTGCTGCAG TCGCTTATTT GGCGAGCCCG GAAGCAGGTT ACGTAACCGG ACAGATTCTG
CATGTCAATG GTGGCATGTG GATGGGGTAA
 
Protein sequence
MAGSLEGQLA LVTGGSRGIG REIAHVLGRQ GARVVATATT SAGAERISAD LAAQGIHGAG 
MALDVTDDAA MSAVLAQIQA SHGAPAILVN NAGITRDQLL LRMKDEDWDA VMATNLRAVY
RLSKLCVRDM LKARFGRIIN ITSIVGVMGN AGQTNYAAAK AGVAGFTRAM AREVAARQVT
VNCVAPGFIS TDMTEGLNEA QRDTLLQQIP AGRLGTVADV AAAVAYLASP EAGYVTGQIL
HVNGGMWMG