Gene AFE_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1788 
Symbol 
ID7136203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1553416 
End bp1554075 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID643530167 
Productmembrane-associated zinc metalloprotease, putative 
Protein accessionYP_002426206 
Protein GI218665892 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACG CCGCGCAATT TATCCAAACC TTGGCCATTT GGGCCATTCC TGTACTGTTC 
GCCATTACCG TGCACGAGGT GGCCCATGGC TGGGTCGCCT GGAAACGGGG CGACCCGACG 
GCCATGCTCA TGGGGCGGCT AACCCTGAAT CCCATTAAAC ACATCGATCC CTTCGGAACG 
ATTCTTCTGC CGGGCATACT GCTCCTGCTT CATTCGCCCT TTCTATTCGG CTATGCCAAA 
CCGGTGCCGG TCAATTTTGA CGGGCTGAAA GATCCCAAGC GCGATATGGT GCTTGTCGCC 
ATCGCCGGGC CGGCCGCCAA CCTCTTGATG GCCTTCTTCT GGACGTTGGT GCTGTGGCTC 
GGCGGACATC TTCCCGGTGC CCTGGCCTAT CTTGATGAAC CCATGCAGTT GATGGGTAAA 
GCGGGCATCA TGATCAACGT GATCCTGATC ATTTTCAATC TGATTCCTAT CCCGCCGCTG 
GACGGCGGCC GGGTGGCTGT GGGGCTCTTG CCGCCGTCCG CCAGCATTGC CCTGAGTCGG 
ATTGAACCTT ACGGGTTCAT CATCCTGATC GTGCTGCTGT TCACCGGCGT GCTCTGGTCT 
GTGCTGGGTC CCCTTTTTCT GATGATGAGC AATTTTTTTC TGACGATGGG TGGTTGGTGA
 
Protein sequence
MSDAAQFIQT LAIWAIPVLF AITVHEVAHG WVAWKRGDPT AMLMGRLTLN PIKHIDPFGT 
ILLPGILLLL HSPFLFGYAK PVPVNFDGLK DPKRDMVLVA IAGPAANLLM AFFWTLVLWL 
GGHLPGALAY LDEPMQLMGK AGIMINVILI IFNLIPIPPL DGGRVAVGLL PPSASIALSR 
IEPYGFIILI VLLFTGVLWS VLGPLFLMMS NFFLTMGGW