Gene AFE_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1766 
Symbol 
ID7136986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1529029 
End bp1529655 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content64% 
IMG OID643530147 
Producthypothetical protein 
Protein accessionYP_002426186 
Protein GI218666324 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGG AAGGCGTGAT CAAATTTCAA CTGGACTGGC ACGCGGGGCC GGTCATCGCC 
TGCGCACTCC AGGCCACCCT CGGCCATTGG CGCGATGTCC TGCACGCCCA TGGACTGATC 
GGCGCCGACC CCGCCCGCTA CGGCGGCATC GGTTTCGGCA ACGTGAGCTG TCGTTGCCGC 
GGCGGTTTTC TGATCACCGC CACTCAGACT GGTCACCTCA GCACCCTGGC TCCGGAGCAT 
TTCTGTCAGG TCACCTACTG GGACATCGTC CACAACCGGA TCCGTGCCGA AGGACCACAG 
CCGCCCTCCT CCGAGGCCCT CAGCCATGCG GCATGTTATG ACGCCCATCC TGATATTTGC 
TGGGTTTTTC ATATCCACCA TCCGCAGCTC TGGAGACAGG CGGCAGATCT GGGATTCGCG 
GCCACCCCCC CGGATGCGGA ATACGGCACC CCCGCCATGG CCCTGGCCGT ATCCGAGCTT 
GCCGGAAAGG CGCACTTACC TCTGCTCATC CGGATGGCCG GCCACGAAGA CGGGCTCATC 
GCCGCCGGTC ACAGCGGCAT GGACGCCTGC ACCCTGCTAT TGAACAAGGT TGCCGAAGCT 
CAGGCTTCCA GCGCCTTGCG CAGGTAA
 
Protein sequence
MTQEGVIKFQ LDWHAGPVIA CALQATLGHW RDVLHAHGLI GADPARYGGI GFGNVSCRCR 
GGFLITATQT GHLSTLAPEH FCQVTYWDIV HNRIRAEGPQ PPSSEALSHA ACYDAHPDIC 
WVFHIHHPQL WRQAADLGFA ATPPDAEYGT PAMALAVSEL AGKAHLPLLI RMAGHEDGLI 
AAGHSGMDAC TLLLNKVAEA QASSALRR