| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1686 |
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| Symbol | cscB |
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| ID | 7134133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1457685 |
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| End bp | 1457951 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643530069 |
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| Product | carboxysome peptide B |
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| Protein accession | YP_002426108 |
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| Protein GI | 218666637 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein |
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| TIGRFAM ID | [TIGR02704] carboxysome peptide B |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.021428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATTA TGCGCGTCGT CTCTGATCTC GTGGCCACCC GGAGAATACC CGGGCTGCAG
AATGCATCGC TCCGGGTACT CACCGATGCG AAAGGTCGGA TCAGCGTGGC CGCCGACCCA
GTAGGTGTGC CACCAGGCAA ATGGGTGATT GCCGTGAGCG GTTCGGCAGC CCGTTACGCT
GCGGGAGATT ACCGGATACT GACAGACCTG ACCATCGCCG GGATCATTGA TCATTGGGAC
CCCAGCGGTA GCCAGACAGG AAACTAA
|
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| Protein sequence | MDIMRVVSDL VATRRIPGLQ NASLRVLTDA KGRISVAADP VGVPPGKWVI AVSGSAARYA
AGDYRILTDL TIAGIIDHWD PSGSQTGN
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