| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1621 |
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| Symbol | |
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| ID | 7135760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1400330 |
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| End bp | 1401880 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530005 |
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| Product | hypothetical protein |
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| Protein accession | YP_002426044 |
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| Protein GI | 218666751 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCA AAACATCACC CAGCCAAACC CGGAAGGGGC GATTTCTGTC GTCCACCGAA
ACGCTGGATG ATCAGCTTTC TCCGGACGGT TCTCCACGTG GACACCATCG CGCAGTCGCA
TCTCGTGTTC ACAACAAGGT GCATCGAGTA AGGGGGAAAC AGGGATCCGG GGCGGTACGC
TCCCTGATCA GGCGTCTGCT TCCCCATGCC GGGAGCAATT TCTACAAGGC CCCGTCGTCC
CGAGGGCCGG CGTTGCAGCA TGCCGGGCGT CGCTGCACGG TAAAGGTGTC CTATGTGCGG
AGCAAGGGGC CGGATCAGTG GCAGGCCCAC GGCAAGTACC TGAGCCGCGA GGGCGCGCAG
CAGGACGGCG AGAAAGGCGA GGGCTTTGAC CGGGATTCCG ATAGCGTCAA CCTGTCGTCG
CGTTTGTCTT CCTGGCAGGA GGAAAACGAT CCACACCTGT TCAAGGTCAT TCTGGCACCC
GAAGACCCGC TGCGGCCAGA GGCCCTGCGG GATATGACGC GCCGATTCAA TGCGCGCATC
CAGCGGCAGA TCGGGCGGGA TTATGAGTGG GCGGCCATCG ACCACCACAA CACCAGCCAC
CCCCATGTTC ACCTGCTGAT TCGTGGCAAG GGCAAGCTCG AACTGGAGCC AGATATGATT
CGCCGGGGGA TGCGCGCCGC CGCCCAGGAG ATTCTCACGG AAAGCCTGGG ATATCGCAGC
GAACGGGAAA TTCAGGCAGC GCGGGAGCGG GAACTGGATC AGCGGCGTTT CACCGCCCTG
GATCGGGGAA TTCTCGACAA GGCGACATCC GCGCCGCAAG GCGGCCACCT GCAAGGCTAT
TCACTGGTCG ATGAGTCGCC CCCCAACTTA TTGAATGACA AAGATCGCGA AAACCGACGA
CTCCGGCTCG CCCGACTGGA AAAGCTCGTG GAAATTGGTG TGGCCGACAA GATCGGGCCG
AATCTCTGGC GACTGGAGCC TGGTTGGGAC AAGGCCCTCA AGGAGCTCCA GATATTGCAG
ACCCGGACGA AGATGCTGGC TGAGGCGCGG GCCTTGATGA CGGAGCCTCG CTGCCCGCCA
CAGGTCACGA AGATCCGGGC AGGCGACCGT CTGGTGGGAC GTGTGCTGAG TACGGGACTG
GATGAGCAAT ATGACCGCAG CTTCGTACTC ATCGAGGGCG TCGATAACCG GGCGCACATC
GTCTACCAGA CGGGATCGAT AGAGAAAGCC AGAGGAAGGC AGGATCTGGG CCTTCGGCAT
CTCGTCGCCC TCACCGGCCT CGACCGTGGC GTTGCCGTCA AGGACTACGG CATCGAGATC
CCGGACCAGG GCTGGAAACG GACAGAGATT CCCGAAGCGG CACTGGATGA CCAACTGGCG
CATGAACGAC GGAATCCACC CAAGGAAATG ATGGACCCGA CTACCGGCTT CGCGGCGGAA
TGGCATCGCC GGCTGCTGGA TCGGCGCAAG CAAAAAGAGA AAGAACGGGC ACTACAGAAA
AAACGGGCCC GGGAACAGGC AAAGCCGCAG CGGGGATCGG AGATCGAGTA G
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| Protein sequence | MNPKTSPSQT RKGRFLSSTE TLDDQLSPDG SPRGHHRAVA SRVHNKVHRV RGKQGSGAVR
SLIRRLLPHA GSNFYKAPSS RGPALQHAGR RCTVKVSYVR SKGPDQWQAH GKYLSREGAQ
QDGEKGEGFD RDSDSVNLSS RLSSWQEEND PHLFKVILAP EDPLRPEALR DMTRRFNARI
QRQIGRDYEW AAIDHHNTSH PHVHLLIRGK GKLELEPDMI RRGMRAAAQE ILTESLGYRS
EREIQAARER ELDQRRFTAL DRGILDKATS APQGGHLQGY SLVDESPPNL LNDKDRENRR
LRLARLEKLV EIGVADKIGP NLWRLEPGWD KALKELQILQ TRTKMLAEAR ALMTEPRCPP
QVTKIRAGDR LVGRVLSTGL DEQYDRSFVL IEGVDNRAHI VYQTGSIEKA RGRQDLGLRH
LVALTGLDRG VAVKDYGIEI PDQGWKRTEI PEAALDDQLA HERRNPPKEM MDPTTGFAAE
WHRRLLDRRK QKEKERALQK KRAREQAKPQ RGSEIE
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