| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1572 |
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| Symbol | |
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| ID | 7134817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1357799 |
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| End bp | 1364395 |
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| Gene Length | 6597 bp |
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| Protein Length | 2198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643529960 |
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| Product | hypothetical protein |
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| Protein accession | YP_002425999 |
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| Protein GI | 218665169 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA CTGAACTGCT TGATGAATCA GAGTCCAAGA AACCGCATCT GACCATAGCC
GTCGCATTGG GTGCGAAGCT CAATCTTGCC GATTTTCAAA ATGCTGTCCC GATGCTCAGG
GAGCTAAGCA TTAACAATGA TTCTGTTGAG GACGAGAGAG AACTCGACCT CAGTATCGTA
TCGGCTCCCA CATTCCTGAA AACCAAGCAA TGGCATATCG ATGCCGTAAG TGCCGGCCAA
CGTTGTCACA TCACCGATTT GGATGTGCAA CTCGATGGCG CTCTGCTGTC TCGCCTCACA
GAAGCCGAGA CGGCGACGGT TTCGTTCGTC TTGCGCCGCC GTAGCGAAGC CCGCGAAGAA
TTGGCCCGGC TTGAACAGAC CGTGGAACTC CTGCCACGGA ACCAATGGGG CGGTTTATCG
CACCTGCCAG ATATGGTTGC CGCTTTCGTT CAGCCAAACG AGCCCGCAGT CGAACGTGTG
CTCAAGCAAA CAGCCGATGT CCTGCGCAAG AACGGCAAGA ACCCGGCTCT GGACGGCTAT
AAAGGCGGTT CGAAGCGTGC CTGGGAACTA ACTTCAGGCA TCTGGAGCGC AGTGGCGGCA
ATGGGGCTGG ATTATGCGCT GCCACCTGCC AGCTTTGAGC ATATCGGCCA GAAAGTGCGT
GGACCGGGCC AGATTTCCGA GTCAGGTTTG GCCACCTGCC TCGATCTCGC GTTGTTCTTC
TGTTCGGCTA TCGAGCAGGC CGGTTTGAAC CCGTTGCTGG TCTTTACACG GGGTCATGTC
TTTGCAGGCG TGTGGCTCAA GAACGAAGAG TTTTCGACCT CCGTGGTCGA TGACATAACG
GCCTTGCGCA AACGGATCAA GCTCAAGGAA TTGGTGCTAT TCGAAACCAC GGTTGCAACA
CACCGACCAG CGCCGACTTT CTCCTATGCG GTGCAACTCG GGGCGCAGCA TGTGGCCGGG
GACGAAGAAG AGGCCTTTGA GCTTGCCGTG GACATACGTC GGACGCGGCT ACAGCGGATC
AAGCCGCTGG CCAGCGCCGA GGCGCACGCG GTAGTGGCTC CTATCGAGAC CGCACCGGTT
ATCGAGCCTG TTTTCGATGA GGCGCCCGAT CTGCCGGAAG ATGAAACTGT TATCGAACCG
GACCCGGCAA CGCTGAATCC CAAGGATCGC CTAGCACGCT GGCAACGTAA GTTGTTGGAC
CTGTCCCTAC GCAACAACCT ACTGAATTTT CGTGGCAGCA AGAAGGCGAT CAAGCTGGAG
GCACCCGATC CTGGCGCCTT GGAAGATTTG CTATCGGATG GCCAACCCGT GCGTCTGCTC
GCTAGGCCCA GCCTCATGGA TGGCACCGAT CCACGGAATC AGGCGATCCA TGAAGGTCGT
GAGCGGGAGA ATGTGCGACG GGAACATGCT CGCGATGCTC TGCAACGCCG CGAGGTGTTC
GTGGACCTGC CGCAGGAAGA ACTGGATACT CGATTCGTGG AATTGTTTCG CTCGGCCCGC
TCCACTTTGC AGGAGGGTGG CGCGAACACC CTGTTTCTCG CCATCGGTTT TCTGTCCTGG
ACTCGCGAAG ACAAGGCCAG CCAGCGTTAT CGCGCACCGC TGATACTTGT CCCTGTGAAC
TTGAGCCGCA AGAATATGCG TTCGGGCTTC ACCTTAACCC TTCACGACGA CGAGCCCCGC
TTCAATCCGA CGTTGATCGA AATGCTGCGC CAGGACTTCA AACTGAACCT GGGCGTGGCC
GACGGCGAAC TGCCCAGGGA CGGTGCCGGC CTGGATGTGG CGGGCATCTG GAAGTCGGTT
GCCCACGCAA TCAAGGACAT CAAGGGATGG GAGGTAACGG AAGAAGTCGT GCTGGCGATG
TTCTCCTTCG CCAAGTATCT GATGTGGAAG GATCTGACCG AGCGTACCGA GCAGCTACGC
GAAAACCCGG TCGTTCGGCA CCTGATCGAT ACGCCGCGCG AGTGTTACCC CCCAGGGATC
GATTTTCCGA ATCCGAGAAA GCTCGACATC GAATTACCGC CCGAGCGAAC CTTTTGCCCC
TTGCCCGCCG ATTCCTCGCA ACTTTCCGCC GTCATGGCGG CTGCGCGCGG CAAGGACTTC
GTCTTGGTCG GGCCACCCGG TACGGGCAAG AGCCAGACCA TCTCCAACCT GATCGCCCAA
TGTCTGGCGG AAGACAAGCG GGTATTGTTC GTTTCGGAGA AGATCGCGGC CCTTGATGTC
GTCCACCGGC GACTACGTGA GGTTGGTCTT GGCGAGTTCT GCCTGGAGCT TCACTCCAAC
AAGGCCAGGA AACTCGATGT GCTGGTCCAG TTCCAGAAGA CCTGGGAGGC AAAGGGGACA
GTCGACCCGA AAGTCTGGCA GGCAGAGGCA CTGCGTTTGC GAAACCTGCG CGATCAGCTC
AACGGCTATG TCGAACGACT GCACCATCGG CATGCTAACG GTATGACCAT TTACGAGGCG
ATCGGCCGGG TTGTCGATGG CGCGGATGTT CCAGACCTTG GGCTGTCCTG GAACGCGCCC
CAAGACCACG ACTTCACTGC CATAGAGGCC CTCAGGGAAG TGGTAGACCG CCTGGAAGTC
AACGCCCGAG CCGTGGGACG GAATGCTCTG CTCACCCACC CGCTCGCAGC CATTGGCCAC
GACGACTGGT CTCCGAGTTG GCAGCACGGG CTGATCGACG CTGCACGTAG CGTGATTTCT
GCTGCGCAAG CGGTGGCACA AGCTTATGAA AGCTTCTCCC AGGCAGTCGG ATTGCCATGG
CTACCTCTAA ACCGGCGTGT CCGGGGCCCG TTGGCCATCC TTGCCCGAAC CTTGCCCCAG
GCTGCCGGGC GGGATTGGCG ATTCGTCTTG CGGCCTGAGA CGAAAACGCT GGCCGACAGG
TTGCAAGAAG CTATCGCGTT GCTGGCCGAG CACCAGGAAC ATAGTGCGGC GCTCTCGCCA
ACGTGGCCGG ATTCGGTGGT CGGTGCCTGC AAGCATGGAT TGCAGTTATT GCAGAGTCGA
CGGGAAACCC ATGCCCAGCT TGGCCTGCCC TGGGCCATTG CGACAGTCCA GGAACTCAAG
AAGGGATTGG GGTTGCTGGA AAATATCGAC CAAGAGGTGA AACAACTTTC CGTCCAGTAC
GGAGAGCAGG TAGAGCAATT GAACGTCACC CAACTCCTGC GCGAGTGGGC CAAGGCCGAG
AAATCCATAT GGCCGATATC CCGGTTAGCG AAACGCAAGA TCCGCAAGGT CTTCGACGCC
ATGTTAATGG GCGAGGGCGA ACCGGATGTC GCCAAGGACC TCCGCACCTT AGTCAAGATT
CGCGCCTTGC GTTCGGAAGC GATGGCGCTC GACCTGGATA CCGATGGTCT ATGGGTCGGC
CTGAAAACCA AGCCCGGCCT GGCGTATTGC GCCCTGCGCT TTCAGGCCGC GCTGAGCGCC
GCTAGAAGCG AACAAAGCTG GGAAGACACG GGTTTTGAGC CGATTGCCGA TGGCCATTGC
GGCGAGCGCC TTGCCCAGGA GTTGGCCCGC ATGCGGACTT TGTGCGCCTT GGATAGCCAG
TTGGCGGCGC TGGAATACCT GCCCTCAGCC ACCGAATCTC TGTGGGCGGG GCTGGCGACG
CGAAGCGAAA TATTGGCGGC CGCGCTGCGC TTCCAGGAGG CCACGTCAGC CATACGGGAA
TCCGGCGCCT TGACCGGCGA CCTCGATGCC GTGGCGTCAG GAGGCTGCGG CACCGCACTA
TCGGCGGACT ATCGGCATCT GCGCGAGCGG GCCGTGGTCG AACAACGACT CGCCGCCTAC
GACGATCTGA TAGACGTCAC GGCTGGTCTT TGGAATGGAC TGAAGACCCG CGTCGGCGAG
GTGGAGAAGG CGTTGAAGTT CCAGTCCTCC ATCTCGGTGG TCATCGCGAA TCTCGCCACT
ACGCCGGAGG ACATCGAGTC CATCAAGACT GCACTGGAAC GGCTCATCGG CGCAGGCAAC
GCGCTACTGG AACCAAACGG TCCTATCGCG AGAGTCGGCG AAGCCTACCT CCATGCCTGG
GGTAGCCTGC GACCGGCAAT CGACCGTCTG GCTGCTGTGG GTGGTTTCTC GAATGCGGCC
AAGAACGAAT TCGGCGAACA GACCCTTGAC GACCTTATTC AGCGCTGCGA TGCAATCCTT
CAAGCTGATA GCCGGCTGCA TGCCTGGTGC GCTTGGCGCA AGGTCAGCGG CCAGGGCATG
GCACTGGGCC TGGCGCCATT GGTTACCGGC ATTGAGAACG GTGCGGTGGC CGATGGCCAG
GTACGCCGTG CGTTCGAAAC GGACTACAGC CGCTGGTGGC TCAACGCCGT GGTGGATGAA
GAACCGGTGA TCCGTTCATT TGTCTCGGCG GAGCACGAAA AGCGCATCGA CGATTTCCGG
GCGCTGGACG AGCGATTCAC CGCGCTGACC CGCGACTGGA TCCGGGCGCG ACTCTGTGCT
GGAATGCCGA GCCAAGACGA TGTCACGCGA AACTCTGAGT GGGGCATCCT GCGTCACGAG
ATGAACAAGA AGAAGCGCCA CATGCCGTTG CGCGAGCTGA TGACCAGCAT CCCGACGGTG
CTGACCAAGC TGATGCCCTG CCTGCTCATG AGTCCTTTGT CGATCGCCCA ATACCTGGCC
GCCAACGCCA CCAGCTTCGA CGTGGTGGTC TTTGACGAGG CCTCCCAGAT ACCGGTCTGG
GATGCGGTCG GCGCCATCGC GCGAGGCAAA CAAGTGGTCA TGGTGGGCGA CCCCAAGCAA
CTGCCGCCGA CCAATTTCTT CGACCGGAGC GAATCGGATC TGGACGACGA AGACGTGGAA
GGCGACCTGG AAAGCATCCT GGACGAATGC CTGGGCGCCA GCCTGCCCAT GATGAACTTG
GCGTGGCACT ACCGCAGCCG CAACGAAAGC CTGATCGCCT TCTCCAACCA CCGCTATTAC
GGCGGCTCGC TGGTCACCTT CCCATCGCCC GTCACCGAAG ACCGGGCAGT GAGCTTCCAC
CCCGTCAAAG GCGTTTATGA AAAAGGCGGG GCTCGAATCA ACAAGCCCGA AGCCATGGCC
CTAGTCACCG ATCTGGTTGG GCGCCTCAAA TCGCCCGGAT TCCGCGAATC AAAGCTGACC
ATCGGCGTGG TCACCTTCAA CACCGAACAA CAGGGCCTCA TCGAAGACCT GCTGGACGAA
GAGCGGCGCA AAGACCCCGC TATCGAGCCT TGGTTCTCCG ATATTGAGCT GGAGCCGGTA
TTCGTCAAAA ACCTGGAAAG TGTCCAAGGC GACGAGCGCG ACATCATGTA TTTCTCGATT
ACCTACGGCC CGGACCTTCA CGGCGCGGTA TCGATGAACT TCGGCCCCAT GAACCGGGCC
GGCGGAGAAC GGCGCCTGAA CGTTGCGATC ACCCGCGCCC GCCACGAACT GCGTGTGTTT
TCCAGCCTCA AGGCCGAGCA GATGGACCTG GCACGTACCC AGGCTATGGG CGTGCGCGAC
CTGAAGCTAT TCCTCGAATT CGCTGAACGT GGCACGCGTG CCCTGGCAGA GAGCACCGAA
GGCAGTCGAG GCAATTTCGA AAGCCCGTTC GAGGAGGCGG TTGCCGCCGC ACTCGCCAGG
AAAGGTTGGG AACTGCACAC CCAGATCGGT GCCTCGACCT TCCGCATCGA CCTGGCCGTC
GTCCACCCCG ACGCCAAAGG CGTCTACCTG AGCGGTATTG AATGCGACGG CGCCACGTAC
CACCGCTCGG CCACCGCCCG CGACCGCGAC AAACTTCGGG AACAGGTACT GCGCGGTCTA
GGCTGGGATA TCTTGCGAGT CTGGTCGACC GACTGGTGGA TCGATGCCGC CGGCACCTTG
GACAAACTGG ATGCCAAACT GCGTGTGTTG CTCGAAATAA GCCGGGTGAA GCGCGCGGAA
GCGGCGGAGA AAGAGGCAGC TCGTCTGGCG GCGGAAGAAG CTGTCGTCAA AGCCAAGGCG
AAAGACGTGA CGGCGCTAAA GGGCGAAGAC GGGCGCGACC ACGCCGCCAT CCTCCCCTCG
GGCTGGCAAC AATTCGACAA GGGTCAGCCC CTGGAAACTG CTGATGTCTA CGCCAGGAAC
GTATCCGAAA CGCCGCCCGC GTCTGCCACA TACTTCGCCG AAACCGATCC CCTGTCCGTG
GTCGATGGTG TCGACGTCGA TGCTTTTTTT AATACCGCCT ACGACCCGAT CCTGGCTAGC
ATGATCGCCC ACGTGGTCGA GATCGAAGGC CCGGTTCTGG ACGCAGTTCT GGCGCGGCGC
ATCGCCAGGG CCCATGGCTG GCAACGTACC GGCTCGCGCA TACGGGAGCG GGTCGAAGCT
CTTGCAGCAA AGCAGTTCAA CATAACTGAG GAAGATGTCG GGACGTTCTA CTGGCCGGCG
GGGCAAAACC CGGATGGACC TATCGTATTC CGGCGAGCTG TTGGGGATAC GGCCAGGATG
GTTGATGAAA TCTGTATGGA GGAACTGGCT GCGCTGGCGA AGACGGTAAT TGCAGCCGGT
TTAACGGGAG AAAGTGCCAT CACCTCGATG GCACGGGCAG TCGGGCTACA TCAGATAAGG
GCCGTCAGCC GTAGTCGGCT TAATAAGGTA ATGCAGATGG TTATGCGGGT GTCCTGA
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| Protein sequence | MNDTELLDES ESKKPHLTIA VALGAKLNLA DFQNAVPMLR ELSINNDSVE DERELDLSIV
SAPTFLKTKQ WHIDAVSAGQ RCHITDLDVQ LDGALLSRLT EAETATVSFV LRRRSEAREE
LARLEQTVEL LPRNQWGGLS HLPDMVAAFV QPNEPAVERV LKQTADVLRK NGKNPALDGY
KGGSKRAWEL TSGIWSAVAA MGLDYALPPA SFEHIGQKVR GPGQISESGL ATCLDLALFF
CSAIEQAGLN PLLVFTRGHV FAGVWLKNEE FSTSVVDDIT ALRKRIKLKE LVLFETTVAT
HRPAPTFSYA VQLGAQHVAG DEEEAFELAV DIRRTRLQRI KPLASAEAHA VVAPIETAPV
IEPVFDEAPD LPEDETVIEP DPATLNPKDR LARWQRKLLD LSLRNNLLNF RGSKKAIKLE
APDPGALEDL LSDGQPVRLL ARPSLMDGTD PRNQAIHEGR ERENVRREHA RDALQRREVF
VDLPQEELDT RFVELFRSAR STLQEGGANT LFLAIGFLSW TREDKASQRY RAPLILVPVN
LSRKNMRSGF TLTLHDDEPR FNPTLIEMLR QDFKLNLGVA DGELPRDGAG LDVAGIWKSV
AHAIKDIKGW EVTEEVVLAM FSFAKYLMWK DLTERTEQLR ENPVVRHLID TPRECYPPGI
DFPNPRKLDI ELPPERTFCP LPADSSQLSA VMAAARGKDF VLVGPPGTGK SQTISNLIAQ
CLAEDKRVLF VSEKIAALDV VHRRLREVGL GEFCLELHSN KARKLDVLVQ FQKTWEAKGT
VDPKVWQAEA LRLRNLRDQL NGYVERLHHR HANGMTIYEA IGRVVDGADV PDLGLSWNAP
QDHDFTAIEA LREVVDRLEV NARAVGRNAL LTHPLAAIGH DDWSPSWQHG LIDAARSVIS
AAQAVAQAYE SFSQAVGLPW LPLNRRVRGP LAILARTLPQ AAGRDWRFVL RPETKTLADR
LQEAIALLAE HQEHSAALSP TWPDSVVGAC KHGLQLLQSR RETHAQLGLP WAIATVQELK
KGLGLLENID QEVKQLSVQY GEQVEQLNVT QLLREWAKAE KSIWPISRLA KRKIRKVFDA
MLMGEGEPDV AKDLRTLVKI RALRSEAMAL DLDTDGLWVG LKTKPGLAYC ALRFQAALSA
ARSEQSWEDT GFEPIADGHC GERLAQELAR MRTLCALDSQ LAALEYLPSA TESLWAGLAT
RSEILAAALR FQEATSAIRE SGALTGDLDA VASGGCGTAL SADYRHLRER AVVEQRLAAY
DDLIDVTAGL WNGLKTRVGE VEKALKFQSS ISVVIANLAT TPEDIESIKT ALERLIGAGN
ALLEPNGPIA RVGEAYLHAW GSLRPAIDRL AAVGGFSNAA KNEFGEQTLD DLIQRCDAIL
QADSRLHAWC AWRKVSGQGM ALGLAPLVTG IENGAVADGQ VRRAFETDYS RWWLNAVVDE
EPVIRSFVSA EHEKRIDDFR ALDERFTALT RDWIRARLCA GMPSQDDVTR NSEWGILRHE
MNKKKRHMPL RELMTSIPTV LTKLMPCLLM SPLSIAQYLA ANATSFDVVV FDEASQIPVW
DAVGAIARGK QVVMVGDPKQ LPPTNFFDRS ESDLDDEDVE GDLESILDEC LGASLPMMNL
AWHYRSRNES LIAFSNHRYY GGSLVTFPSP VTEDRAVSFH PVKGVYEKGG ARINKPEAMA
LVTDLVGRLK SPGFRESKLT IGVVTFNTEQ QGLIEDLLDE ERRKDPAIEP WFSDIELEPV
FVKNLESVQG DERDIMYFSI TYGPDLHGAV SMNFGPMNRA GGERRLNVAI TRARHELRVF
SSLKAEQMDL ARTQAMGVRD LKLFLEFAER GTRALAESTE GSRGNFESPF EEAVAAALAR
KGWELHTQIG ASTFRIDLAV VHPDAKGVYL SGIECDGATY HRSATARDRD KLREQVLRGL
GWDILRVWST DWWIDAAGTL DKLDAKLRVL LEISRVKRAE AAEKEAARLA AEEAVVKAKA
KDVTALKGED GRDHAAILPS GWQQFDKGQP LETADVYARN VSETPPASAT YFAETDPLSV
VDGVDVDAFF NTAYDPILAS MIAHVVEIEG PVLDAVLARR IARAHGWQRT GSRIRERVEA
LAAKQFNITE EDVGTFYWPA GQNPDGPIVF RRAVGDTARM VDEICMEELA ALAKTVIAAG
LTGESAITSM ARAVGLHQIR AVSRSRLNKV MQMVMRVS
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