Gene AFE_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1460 
SymbolrnhB 
ID7134543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1261711 
End bp1262301 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content64% 
IMG OID643529848 
Productribonuclease HII 
Protein accessionYP_002425888 
Protein GI218665608 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCG CCCCAATTCT GGAACATTAT GGACCCTGGT GCGCGGGTGT GGATGAAGCG 
GGGCGAGGGC CCTTGGCGGG TCCAGTGGTG GCAGCGGCGG TGATTCTGCG CGTACCTCTT 
CACGGTCTGG ACGATTCCAA GAAAATGACG GCCGCCGCAC GGACACATTG GGCCGCACGT 
ATCCGCAATG AGGCCCTGGC CTGGTCGGTA GCCCGGGCTG CGGTCTGGGA GATCGAGCGC 
TACAATATTC TCCAGGCGTC GTTGCGGGCC ATGGCGCGGG CTATCGTCGG CCTGCCCCGG 
CAGCCTCGGC GGATTCTCGT CGATGGCAAC CAATCGCCTC CCGGTTGGCA AGTAGAGACG 
CTGGTGGGCG GCGATGGCCG GGTGGACGCC ATTGCTGCGG CAGGTATTCT GGCTAAAGTG 
ACACGGGATG AGGAGATGCA GTTGCTCGAC CGATATTACC CTCAATATGG GCTGGCGCGG 
CATATGGGTT ACGGCACGGC GGTGCATCTC CAGGCATTGC GGCGCTGGGG TCCCTGTGCC 
CTGCATCGGC GCGGCTTCGG ACCCGTCGAC CAGGCCTGGG AGACGCAATG A
 
Protein sequence
MKSAPILEHY GPWCAGVDEA GRGPLAGPVV AAAVILRVPL HGLDDSKKMT AAARTHWAAR 
IRNEALAWSV ARAAVWEIER YNILQASLRA MARAIVGLPR QPRRILVDGN QSPPGWQVET 
LVGGDGRVDA IAAAGILAKV TRDEEMQLLD RYYPQYGLAR HMGYGTAVHL QALRRWGPCA 
LHRRGFGPVD QAWETQ