Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1448 |
Symbol | uppS |
ID | 7135274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1249221 |
End bp | 1249952 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643529836 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_002425876 |
Protein GI | 218665933 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGCC ACATTGCCGT CATCATGGAT GGCAATGGTC GGTGGGCGTA CCGTCGGCAC TTGCCACGGG TGGCCGGCCA TCGCCGCGGT GCCGAGGTGG TCCGGGAGAT GGTGCAGTCC TGCGCGGATC TCGGTATTCC CTACCTGACG CTTTTCGCTT TCAGCACCGA GAACTGGCGA CGTCCAGCCA TTGAAGTTCG TTTGCTGATG AATCTGTTCC GTCTTTTGCT GCGGCGGGAA GCACGCAAGT TGCATGAGAA TGGCGTTCGT CTGCGTATCA TCGGTGATCG CAGCGCACTG GATCCGGAGA TATGCCAGCT CATCGATGAG GCGGAGGCGC TCACCCGCAA CAATCAGCGA CTCCAGCTCA ATCTGGCAGT GAATTATGGC GGACGTTGGG ATATTGCACA GGCAGCACGA GCAGCGATGG CGGCGGTACA GGCGGGGGAC CTCGCCCTTG AAGACTTCTC CGCCGCACAT ATTGCCCGGC ATCTCTGTCT GGCAGACATC CCCGAGCCCG ATCTGCTGAT CCGTACCGGT GGCGAGGAGC GTATCAGTAA CTTTCTGCTT TGGCAGTTGG CTTATACCGA GTTTTACTTC AGCGATACGC TGTGGCCGGA TTTCAACCGC GCAGCTCTGG AGCATGCGCT GCATTCTTTC GCGCATCGGC AGCGGCGCTT CGGACGTACG GGCGATCAGG TGCTGGAGGG CGATTGCTCC GTCAGCGACT GA
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Protein sequence | MPRHIAVIMD GNGRWAYRRH LPRVAGHRRG AEVVREMVQS CADLGIPYLT LFAFSTENWR RPAIEVRLLM NLFRLLLRRE ARKLHENGVR LRIIGDRSAL DPEICQLIDE AEALTRNNQR LQLNLAVNYG GRWDIAQAAR AAMAAVQAGD LALEDFSAAH IARHLCLADI PEPDLLIRTG GEERISNFLL WQLAYTEFYF SDTLWPDFNR AALEHALHSF AHRQRRFGRT GDQVLEGDCS VSD
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