Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1397 |
Symbol | lepA |
ID | 7136806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1211831 |
End bp | 1213633 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643529789 |
Product | GTP-binding protein LepA |
Protein accession | YP_002425829 |
Protein GI | 218667461 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAC AGCAGCATAT TCGCAATTTT TCCATTATTG CCCATGTGGA TCACGGAAAA TCCACTCTGG CGGACCAGTT CATCCGTCTT TGCGGGGCGT TGACCGAGCG TGAAATGTCC AGTCAGGTGC TGGATACGAT GGATATCGAA CGCGAACGCG GCATTACCAT CAAGGCGCAG AGCGTGCGCC TGCAGTTTCG CGCCGCAGAT GGACAGGAGT ACCAGTTCAA CCTCATCGAT ACACCGGGCC ATGTGGATTT TTCTTACGAA GTGAGCCGTT CCCTGGCTGC CTGTGAAGGC GCGCTGCTGG TCGTGGATGC ATCGCAGGGG GTGGAAGCGC AAAGCGTAGC CAACTGTTAC ACGGCGCTGG AACACAACCT GGAGATCCTG CCGGTCCTCA ACAAAATCGA TCTGCCGGCT GCCGATCCGG AGCGGGTGCG CAGGGAGATT GAAGCAATAG TCGGGCTGCC TGCTGACGAT GCCGTAGAGG CCAGTGCCAA AGAAGGTACC GGTATTCGGG AGATTCTGGA GCGGGTGGTG GAACGCATCC CACCTCCCCA GGGTGATCCG GAAGCTGCGC TGCAAGCCCT CATCATCGAC TCCTGGTTCG ATAATTATCT GGGGACGGTG GTATTGGTGC GGGTGATGAA CGGTTCCATC CGTCCCGGTC AGCGCATCCT GACGATGGTG GGTCAGAAAC CTTATGTGGT AGAAAAGGTT GGCGTTTTTA CCCCAAAATC CCTGATGGTC CCCGCCCTGG AAACGGGTGC GGTGGGCTTT GTCATTGCGG GCGTGCGGAC CATTGAAGGC GCCCGGGTGG GAGATACCCT GACCGAGCAG GACCGCCCCG CCAGCGCGCC TCTGCCCGGT TTTCGCGAGG TGCAGCCACA GGTATTTACC GGGCTCTATC CGGTGGACTC GGCGGATTAC GAAAGCTTTC GCGAGGCGCT GCAGAAGTTG CGCCTGAATG ACGCGGCCCT GCAGTTTGAG CCGGAGACTT CACAAGCCCT GGGTTTTGGT TTCCGGTGCG GATTTTTGGG GCTTTTGCAT ATGGAAATCG TGCAGGAGCG TCTCGAACGC GAGTACCAAC TGGAACTGAT CAGTACGGCA CCCACCGTGA TCTATGAGGT GCTTACCACC GACGGCCAGG TGCTGAAGAT TTCCAATCCC GCCGAATTGC CTGCGGCACA GAAGATTGCG GATATTCGCG AGCCGGTGAT TACCGCGAAC ATTCTGGTAC CGGAAACGTA TCTCGGCCCG GTAATCGCTC TTTGTGAAGA GCGGCGTGGG CGACAGAAGA ATATGCAGTT CACCGGCGGG CAGGTAATGC TGCGCTATGA GTTGCCGCAC AATGAAGTGG TCCTGGATTT TTTTGATCGC CTCAAATCGG TGAGCCGGGG TTATGCCTCC ATGGACTATG AATTTGCACG TTTTGAGAGT GGGCCGCTGG TGAAAATGGA CATTCTCATC AACGGGGAAA AGCTGGATGC ACTGTCCTGG ATCGTGCACC GTGATGTGTC CGAACGGCGC GGCAGGGAAC TGGTGGTCCG TTTGCGTGAT CTGATTCCCC GACAGATGTT CGAGGTGGCT ATCCAGGCAG CGATCGGCGC CAGGGTCATC GCCCGGGAGT CGGTCAAGGC CCTGCGTAAG AATGTGCTGG CCAAGTGTTA TGGTGGCGAT ATTTCGCGCA AACGTAAACT GCTGGAGAAG CAGAAAGAGG GCAAAAAGCG CATGAAGCAG GTTGGTCATG TGGAGATTCC CCAGGAAGCC TTTCTGGCGG TGCTGAAAAG TGACAAGAGG TAA
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Protein sequence | MTEQQHIRNF SIIAHVDHGK STLADQFIRL CGALTEREMS SQVLDTMDIE RERGITIKAQ SVRLQFRAAD GQEYQFNLID TPGHVDFSYE VSRSLAACEG ALLVVDASQG VEAQSVANCY TALEHNLEIL PVLNKIDLPA ADPERVRREI EAIVGLPADD AVEASAKEGT GIREILERVV ERIPPPQGDP EAALQALIID SWFDNYLGTV VLVRVMNGSI RPGQRILTMV GQKPYVVEKV GVFTPKSLMV PALETGAVGF VIAGVRTIEG ARVGDTLTEQ DRPASAPLPG FREVQPQVFT GLYPVDSADY ESFREALQKL RLNDAALQFE PETSQALGFG FRCGFLGLLH MEIVQERLER EYQLELISTA PTVIYEVLTT DGQVLKISNP AELPAAQKIA DIREPVITAN ILVPETYLGP VIALCEERRG RQKNMQFTGG QVMLRYELPH NEVVLDFFDR LKSVSRGYAS MDYEFARFES GPLVKMDILI NGEKLDALSW IVHRDVSERR GRELVVRLRD LIPRQMFEVA IQAAIGARVI ARESVKALRK NVLAKCYGGD ISRKRKLLEK QKEGKKRMKQ VGHVEIPQEA FLAVLKSDKR
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