| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1305 |
|---|
| Symbol | |
|---|
| ID | 7134509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1136287 |
|---|
| End bp | 1137681 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643529701 |
|---|
| Product | transposon transposase |
|---|
| Protein accession | YP_002425741 |
|---|
| Protein GI | 218666172 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCG TTACCCGCAC ATTACAGGCT GATATTCCTG ACGCTTTGCG GACGATCTGC
AAGGCCATGG GGTATGTGCG GGCGGACATC TGGCGGCGGT ATGGCGCTCT GGGAACTATT
GGCAAGTCTG CCAACGATAT CCGCAAAGAA ATCTCGGCGG CAGGCTTGTA TTCCACCCTC
CCTGTGGACG GTACCATTCG CAATGAAACC ACCAAGGACA TTGTAAACGA CGTTCTACTG
TACAAGGCGG CTGCGATGCA AAAAGTGCGC AAAGCCATTG CCGCTCGCAA TGGGGATGAG
GCTGAACGCA AACGACTTTT TACGTTGCTG CGTAACGACC AATGGCTCAC CGACAATTTT
TTGCACCGCC AGATGCGCAA GCATTTCCGG CATGGAAAGT CATCCGTTGC CAACCAGTTC
GTGGTCCGGT CAGACAAATA CGCTACGGAA GTCGTGGACG GTCATCTGGT GATTGTCATT
CATATCGCGG CGAAGTACGG CGCTCCAATC CGATTGACCA CCACGTCCAG CGGCAAGAAC
GTCACTCTGT CGGGCAGCAA CCTTCGGGTG GTGGTCAAGG ATGGATTTAC GGAGATCCAC
TATGCCGCCA CCAAAGGCGA TGGGCGGCTT TGTGGTGATC AAATGATGGG CATCGACAAA
GGTTATACGG AAGCCTTCAC GGATTCCGAT GGTGTTGCGC ATGGGGAAGC CTTCGGTGCG
GTGCTGACGG AATATAGTGA TCAGACATCA GCGACGGGTA AAGCGCGAAA CAAACTCTAC
GCTTTGGAAA AGAAGCATCG GGAAGCGGGA CGCATCGTTA AAGCGGATCA CATCAAACGC
TGCAACCTCG GGCGTATCAA GATAGACGGG CGTAGAGACC ATACCCGCAA GCGGTTACGC
ACCATCGCTT TCCAGGCGGC TCACACGATT GTGGATAAGG CGACTGTAGT GGTCTCAGAA
GATTTAACCT CTCCCATTGC CAAAAAGCAG GTATGGAAGC AATACAACAG ACGTATGAGT
GCATGGGCCA AAGGCGTGCT CGCCGATGCC CTGGACTCTG TATGTACGCA GCGGCAGGCG
GAACATCGCT TGGTGAATGC AGCCTATACA TCGCAAATGG ACTCGGTGAC GGGCTTGCTG
GAAGGCAAGC GCGTGGCCGA TAAATTTTAC CGTGCGAACG GGGATGTGCT CCAGGCTGAC
CACAATGCTG CGTTGAACGT GCTGAGAAGG TACGAAGATA CCGAGATCAC TCGGTTCACT
CCCCACCAGG AAGTCCGACG TATTCTTCTG GCACGATCTC CGGCGCAACT GAGCGTCAAG
AGGCACGAGT TGCAGGCGAA AACCTATCAA CCGTGTGCGG ATAAATCCTC TGTACAGGTT
TGTACAGGTT TATAG
|
|---|
| Protein sequence | MITVTRTLQA DIPDALRTIC KAMGYVRADI WRRYGALGTI GKSANDIRKE ISAAGLYSTL
PVDGTIRNET TKDIVNDVLL YKAAAMQKVR KAIAARNGDE AERKRLFTLL RNDQWLTDNF
LHRQMRKHFR HGKSSVANQF VVRSDKYATE VVDGHLVIVI HIAAKYGAPI RLTTTSSGKN
VTLSGSNLRV VVKDGFTEIH YAATKGDGRL CGDQMMGIDK GYTEAFTDSD GVAHGEAFGA
VLTEYSDQTS ATGKARNKLY ALEKKHREAG RIVKADHIKR CNLGRIKIDG RRDHTRKRLR
TIAFQAAHTI VDKATVVVSE DLTSPIAKKQ VWKQYNRRMS AWAKGVLADA LDSVCTQRQA
EHRLVNAAYT SQMDSVTGLL EGKRVADKFY RANGDVLQAD HNAALNVLRR YEDTEITRFT
PHQEVRRILL ARSPAQLSVK RHELQAKTYQ PCADKSSVQV CTGL
|
|---|
| |