Gene AFE_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1217 
Symbol 
ID7134608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1072193 
End bp1072804 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID643529614 
Producturacil-DNA glycosylase, family 4 
Protein accessionYP_002425654 
Protein GI218665955 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT GTCAGCGGTG TCCATCCCTC TGCGCCTCCC GCACCCAAAT CGTGTTCCCC 
GACCTGCCTG AATTTGGCAG GTATTGCCGC GTCCTGGTGA TTGGCGAGGC CCCGGGTGCC
GATGAGGACG CCCAGGGCAA GGGTTTCGTA GGCCGAGCCG GACACACCCT GCATGCGCTG
ATGGAAGAGC ACGGGCTGCG ACGCGGGCAT GACTATGGAT GCGCCAACAT CGTGCGGTGT
CGGCCGCCGG AGAACCGGAA GCCAACCGAT ATAGAAATAG GCATGTGTTT GCCGAATCTC
GCAAACACCA TTGCCAATGC CCGCCCCGTT GCCGTTCTTG CCGTGGGCGA AACAGCAACT
CGCGCCATTA CCGGCATCCG TGGTCTTTCG GAGAATCTAC GATTCCTGCG GTATCATGAC
CACGATCCAA TCCCTGCGGA AATGCTTTGC AACCTCAATA TCCGGGCGAT GTGGCCACAT
GGGGCGAAAC TTTTCCCCAT GCCGCACACG AGTCCCTTGG CCTGGAACCG CAACGCGCCG
GACGGCCGGA AGTGGTCGGC TTGGGGCCGG GAGCAGGTAT CGCTATTGGC GGCCTTGTTG
CCCAAGGGAT AA
 
Protein sequence
MDNCQRCPSL CASRTQIVFP DLPEFGRYCR VLVIGEAPGA DEDAQGKGFV GRAGHTLHAL 
MEEHGLRRGH DYGCANIVRC RPPENRKPTD IEIGMCLPNL ANTIANARPV AVLAVGETAT
RAITGIRGLS ENLRFLRYHD HDPIPAEMLC NLNIRAMWPH GAKLFPMPHT SPLAWNRNAP
DGRKWSAWGR EQVSLLAALL PKG