9 homologs were found in PanDaTox collection
for query gene AFE_1205 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_1205  Tn5468, orf5  100 
 
 
555 aa  1135    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3195  Tn5468, orf5  95.54 
 
 
543 aa  1055    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2796  hypothetical protein  96.03 
 
 
282 aa  540  9.999999999999999e-153  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_2799  hypothetical protein  94.67 
 
 
269 aa  483  1e-135  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0142  hypothetical protein  28.62 
 
 
545 aa  81.6  0.00000000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.843522  normal 
 
 
-
 
NC_003909  BCE_0186  hypothetical protein  20.22 
 
 
533 aa  69.3  0.0000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.959802  n/a   
 
 
-
 
NC_007498  Pcar_2921  transposition regulatory protein  24.54 
 
 
491 aa  55.5  0.000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3943  hypothetical protein  24.32 
 
 
539 aa  49.3  0.0002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3930  transposition regulatory protein  22.17 
 
 
523 aa  43.5  0.01  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
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