| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1205 |
|---|
| Symbol | |
|---|
| ID | 7136638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1045661 |
|---|
| End bp | 1047328 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643529602 |
|---|
| Product | Tn5468, orf5 |
|---|
| Protein accession | YP_002425642 |
|---|
| Protein GI | 218665068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCAAAG TGCCTGAAGA TTTGACGCTA CACTGGCTGG TTGGAGTCGA ACAAGACGAT
AAAAAGGGGT GGCGGGTACG TATAGTCACC TGCGGCGTGT CGTCAGGCAA ATTTGCCATG
TGGAGCGTAC CTATTGGGCT GTTCCCGGTA CTGGCACTCG GTTATCGCTT CTCCGAAGGT
AGGCTGCTCC CGATAACCTA CGGCGAATAT TCGGAAGTGA TTGTTCCCAA TCTGGCGGCA
GGAGAGGAAA TCAACTCGTC CGACATTCCG CCAGAATTAT ATTCGTTCGA AGGAAAATCA
CACGGGGTGC AGCGACTCTT GCGTTATCGA GTGGGTCAGG TGGAGTATTT GGTGCCGACC
ATGGAACTCA TCCGTAGCCT GTTCCTGCAT AATAAAACGC TTGCCAATCA TATTATGCAG
CCTGGAGGCA TCATGACGCT CTTCAGGCCG GTCGAACCTG GGTTTCATCC TCGTCTGCAG
CTCGATTATA CCCAGCAAAT GCCAGTGAGA TCACTCAAGA GGTCATTTAT CTTGGAGTTT
TCTTGGCTGG CGGTGGATCC TGATGGGCAA CGCGCCTGGG ACAGTGTTTA CGAACGGACA
TTCAAACAAA AGTATATGAC CTTTGATCCT CCCGATCTGC ATGACTGTGG AATTAAGTTT
CGTGGAGTGC GGAAAGGAAA TCAGTGGCTT ATCTTAGAAA TCTCCGAGTT CACGGGGAAG
AGGGTACCCT GTGATGTTTT GTATTTTTCT CATCCGTCGC TGGGGAAAAC GATTACGGTG
CGGATGCCAA AAAGTCAGCC TAAAAGGCGT GGACCAGACG GTGGGTCGTC ATCAGGTGAC
GTTCCTGTCA TAGACACGGT AGGTTCGGGA AGTAGGACGG ATGTTCATCA GCCAGCCCTG
CCGATATTGA CCAGAACCAG CATTTTCGAC CGGGAAATCG AAGTGCGTCG GGTGGATAAA
AAGGATCGGA TACGTGTTAT CAGGCGTAGA AACAAGGGCG CCGCGGGCAC CAGTGAAAAT
GAGGGAAGGA CCGGAAAATA TCGGGGAAGT GGAAAAACGC CACCGCCTAA AGTGAGCGTT
TCCCCTGAGT CTCTGCACGA CGATCTCCTG CCCATGGAGT TTCAGGTGCT TGCGGTCGAG
AAAGGTGAAG GTGCGGACGA TCTAAGGCGA TTGATGCAGG TGATCCGTAC CATGGCGAAC
GGGTTAATAG ATGTCCGTGT TTTGACGGCG CTGTGCCGGC TTGAAACCGG GCAGGCCTTT
TCCATGGTCG GAAGGCGCCA AAGATTATGC CTGGTTGCCG TATTTTTCCA GAAAAAGACG
TTCCCGGTGG TGTTGCTGGA TGTGGAGCAT AGTAACAAAA TGGCTTTGTC TACGCTGTTG
CTGCGATTCA AGGGTAGTAT CGGGCTTCGA GATATCGAAA ACCATATCCT GTTGATTCTT
CACCGGCTGG ATTGTCGGGG AGGACGTTGG GACGTTACGG AGAATGAAGG TGACCAGCTT
GCTCATTATG AGCGGCTGCG GAAGGTGATG AGACCTGATC CGGGAGGTAA TGAGCAGCAA
CAGAATGGCG TTTGGGCGGA AAAACTGAGG AAAAAGCTCT TTGAGGTTCC CGGCAGATTG
GACATCACAG GGGAGTCATG GTCCGATTGC GTGGTGATTT TGAAGTGA
|
|---|
| Protein sequence | MRKVPEDLTL HWLVGVEQDD KKGWRVRIVT CGVSSGKFAM WSVPIGLFPV LALGYRFSEG
RLLPITYGEY SEVIVPNLAA GEEINSSDIP PELYSFEGKS HGVQRLLRYR VGQVEYLVPT
MELIRSLFLH NKTLANHIMQ PGGIMTLFRP VEPGFHPRLQ LDYTQQMPVR SLKRSFILEF
SWLAVDPDGQ RAWDSVYERT FKQKYMTFDP PDLHDCGIKF RGVRKGNQWL ILEISEFTGK
RVPCDVLYFS HPSLGKTITV RMPKSQPKRR GPDGGSSSGD VPVIDTVGSG SRTDVHQPAL
PILTRTSIFD REIEVRRVDK KDRIRVIRRR NKGAAGTSEN EGRTGKYRGS GKTPPPKVSV
SPESLHDDLL PMEFQVLAVE KGEGADDLRR LMQVIRTMAN GLIDVRVLTA LCRLETGQAF
SMVGRRQRLC LVAVFFQKKT FPVVLLDVEH SNKMALSTLL LRFKGSIGLR DIENHILLIL
HRLDCRGGRW DVTENEGDQL AHYERLRKVM RPDPGGNEQQ QNGVWAEKLR KKLFEVPGRL
DITGESWSDC VVILK
|
|---|
| |