Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1145 |
Symbol | |
ID | 7134850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1022137 |
End bp | 1023042 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529542 |
Product | tyrosine recombinase, phage integrase family |
Protein accession | YP_002425617 |
Protein GI | 218666422 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00135559 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGACA TTGAAGCGGT AACCGAAGGC TTCATCCGCT GGATATCCGG CCCGAACTTC CGGAATCCCT ACTCGAAGGC CACGATTCGC ATTTACGGAC GCAATGTGCA TCGCTTTCTG GAATTTCTGG ATTTTGATGG TGTAGAGCGC ATCAGCGAAG CCAGCATCCA TCTGGTCCGC AAATTCGTCA TGACCGGACA GTCTGGCGGC ACCGCTCCAG TCAATACGCA GAACGTACGC ACAGGCGCGT TAGCGCTTTT CTTCGACTAC CTGGAATCCA CGGAAGAACA TGGGCCGTTT TCCGGGAATC CCGCCAGAGC CCTCATCGAA GACCAAAAAC ACAAGAAAGG TGGCAACGTC GGCAAAGCTA CCGCCAGATT GCGTCCGGTG CTCGAATGGG ACGATATGGA CCGCTTGCAG TATGAAGCAT CGAAACAGGA AACCATTGCC GGAATCCGGG ACGCCGCCCT GATCGGATTC ATTTTCGATA CAGGCCTGCG CGCCAGCGAG ATATGCGCCC TTCCCCACTC GGCGGCCGAG TATTATTTCC AGGGCCGATT GCGGGTCATC GGCAAGGGAG ACAAGGAAAG GCTCGTGCGT TTTACGCCGG AGCACGCGGA TCGCCTACGC GCCTGGATAC GGACCCGGGC GCGGGTCGTA TCCAAAAGCG ATGCCCTGTT TCTCACGGAC GAGGGGAATG CCCTGAGCAC CCAGGTGCTC TACATGATTG TCCGGCGGCT TCTCGACCGC GCCGGAATCC AGAAGGCGCA ACAAGGACCC CATCTCCTGC GGCACACCGC CGCCAGCCGC TGGTTGGCCA AGGGTATGGA TCTGCGCCAG GTGCAAGAGA ACATGGGGCA CAGCAACATC GGAACGACCA GCAAGTACCT GCACTTGCTG GGATAG
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Protein sequence | MIDIEAVTEG FIRWISGPNF RNPYSKATIR IYGRNVHRFL EFLDFDGVER ISEASIHLVR KFVMTGQSGG TAPVNTQNVR TGALALFFDY LESTEEHGPF SGNPARALIE DQKHKKGGNV GKATARLRPV LEWDDMDRLQ YEASKQETIA GIRDAALIGF IFDTGLRASE ICALPHSAAE YYFQGRLRVI GKGDKERLVR FTPEHADRLR AWIRTRARVV SKSDALFLTD EGNALSTQVL YMIVRRLLDR AGIQKAQQGP HLLRHTAASR WLAKGMDLRQ VQENMGHSNI GTTSKYLHLL G
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