Gene AFE_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1104 
Symbol 
ID7135350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp995241 
End bp996518 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID643529501 
Productconserved domain protein, putative 
Protein accessionYP_002425576 
Protein GI218665226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCC GCGCCGCCAT CCTCCTCGCT CTCTTCGCCG GCCTGCCGGC TGTAGGCTTG 
TCGGACACGG CCCAGGCCGC ATCCGTCTAT GGCATCGCCC AGGACGACCT CAACATGAAC
ACCCTGGGCA CGCCGTATAT CCATTCGCGG CATACGGGGC TCATGCCCTA CTGGGGCCCG
TGCTATCGTT GTTCGACGCA GATGGTCTCG GAGCCCGCCT GCACTGTTGG AACGCCCCCC
GTGACCCTGG CCTCCTGGAC CAATAGCGGG AATAGCTCCT GTGGCGGATA TGAAAGCGAT
TCGTTTACGG CCTCGACCCA ATGCTCGACC AGCGGAGTGG TGCAACTGGT CGTCACGAAT
TCCAGTTACA ATCCTGCGGA TACCACAGGT AAGGTCAATT ACGGGGTAAC CATTCCATTA
TCCATTCCCA ACGGTGGCAA CTACGGTTCC GCCGTGAATA TGAACGACGT GTTTGGTGGC
AATAACTGTT CCCAAAACTT TGACTGGTAT CCCAGCTACG CCGTCACCGG AGAAGATGTC
AACGGTACCT TCAATGGGAC GGTGACGTTC GGTAATTATC TGTCGCCATC GCAATACGCG
CAAAGCCCGT CTTTCCCAGT GGTATTCCAG AACTACAAAC TGGTGGCGGT GCGAACCTGC
CATCAATACG CACCGACCTC CAGCGAGTGC CAGACGCCGC CGCCGCCAAC TCAGACCAAT
CTTCCGGTAT ACCAGTGGGC GTGTGATATA GCCGAGAGTG GATGGCAACC AGGCGGAATT
TGTTCCAACA GCTTGATATC GGGAAATGGC GCCGAATGGA TTTTTGGCGC TAATGATGGG
CTCAGCGGCA CGGCGCAGTC CGGGTATTCG GTCATGGAGG CGCAATACGA CAACCCGACG
AACCTGGGCA TGCCGGCGAC GCTCACCTTT GCCGCTGATA ATTTCGGTTG GGTGTGGATC
AATGGGCAAC AGGTCGGATA CAAGGCGGGT TTTAGCACGC TGGATACGGT CTCCATCATG
TTACCGCCTG GGACGGATAC CATCGACTTC ATGGTGATGA ACGATCCGAA CGCGCCTGTT
AGCGATCCCA GTGAGTTCCA GAACCCGGCC GCCGGCATTC TGGCCATTTC CAACAGTTCT
GGCCAGGCAC TGATCGGGAC CAACGACACC AACTGGTATT TGGTGGACAA CCCGCCGGCC
GCCCCAGTCC CGTCGCCGTC TTCGTTGCTC GCCGGCACCG GATATACCCC GCAAAACTGC
GCCGCAGGAG GGTGCTGA
 
Protein sequence
MKLRAAILLA LFAGLPAVGL SDTAQAASVY GIAQDDLNMN TLGTPYIHSR HTGLMPYWGP 
CYRCSTQMVS EPACTVGTPP VTLASWTNSG NSSCGGYESD SFTASTQCST SGVVQLVVTN
SSYNPADTTG KVNYGVTIPL SIPNGGNYGS AVNMNDVFGG NNCSQNFDWY PSYAVTGEDV
NGTFNGTVTF GNYLSPSQYA QSPSFPVVFQ NYKLVAVRTC HQYAPTSSEC QTPPPPTQTN
LPVYQWACDI AESGWQPGGI CSNSLISGNG AEWIFGANDG LSGTAQSGYS VMEAQYDNPT
NLGMPATLTF AADNFGWVWI NGQQVGYKAG FSTLDTVSIM LPPGTDTIDF MVMNDPNAPV
SDPSEFQNPA AGILAISNSS GQALIGTNDT NWYLVDNPPA APVPSPSSLL AGTGYTPQNC
AAGGC