Gene AFE_1040 details

Gene Information

• Locus tag: AFE_1040
• Symbol: csf3
• ID: 7136468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 939196
• End bp: 939888
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643529438
• Product: CRISPR-associated protein, Csf3 family
• Protein accession: YP_002425513
• Protein GI: 218665850
• TIGRFAM ID: [TIGR03116] CRISPR-associated protein, Csf3 family

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCCGC TGGAAATCCG CTTCCGGCTG GCGACGCCGA TGCTTGTCCA TTCGGACCTG 
CCCTTTCATT TCGATGCGCT GATGGCTTAT GCCGTCAGCC GGGACAGTGA GATGAATGGC 
TCGGCGGATC CCTGGTTGGA TGCGGAAGAC CTGTCAGAAA TCCTGGGTCG GGAAGGCGAG 
GGAGATTCCT GGGTCTGGCA GGCCTCCAGA ATGGAGGTCT TGGCCAGACT CCCTTACCCG 
AAGATCTATG AATCCGCCAA CAACCTGCGG TTCACCGATC CATCACGGTT TTACGATGAT 
CTGGACCGGG GGTTGTGGCA GCCGCGCGGA AAAGTGAATC CGGAGACCTT CCGGATCGAT 
CCCAATAGCG GCCAGCAACG CGGGTACCAG ATGTATCTGA CGACATCCAA CGCGCAGGAG 
GTCGCCTTTT ATGTGATCGG CGAGGAGGAA GCCATCCGCT TTTATCTCTC GCAGGTGACC 
CATCTGGGGA AAGGCAGCAA GAACGGGTAT GGACGCATTT CCAACGCGGA AATTCGGGAC 
TGCCCGGAGG CCGCCGACCG GTGGCGCAAA CGCTGGCTCC ACAAAGATAT GCCGGGGGCC 
GATGGCGTGG AGTACGCCCC GGTCATGGGG CGGTTGCGTC AACCTTATTG GGACAAGGCG 
CATTTTCATC CGGTCTTGGA ACCGGTCAGA TAA 

 

Protein sequence

MKPLEIRFRL ATPMLVHSDL PFHFDALMAY AVSRDSEMNG SADPWLDAED LSEILGREGE 
GDSWVWQASR MEVLARLPYP KIYESANNLR FTDPSRFYDD LDRGLWQPRG KVNPETFRID 
PNSGQQRGYQ MYLTTSNAQE VAFYVIGEEE AIRFYLSQVT HLGKGSKNGY GRISNAEIRD 
CPEAADRWRK RWLHKDMPGA DGVEYAPVMG RLRQPYWDKA HFHPVLEPVR