Gene AFE_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1001 
Symbol 
ID7135294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp913773 
End bp914957 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content56% 
IMG OID643529399 
Producthypothetical protein 
Protein accessionYP_002425474 
Protein GI218665383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.428504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATTC GTTTGATCAG GGACGGCATT TTAACCAGCG AACCAGTATG TTCGCTTTCT 
TGGCCTTCGG AGGTTCTTTA CCGGCGGCTT ATGTCTGTTG TAGATGATTA TGGCAGATTT
CATGCCAATC CAAGGTTGGT TCGTGCGGCT TGTTACCCGC TGCAGATCGA TAAAGTTTCC
GACGCGGACA TTGGGAAGTG GCTCACCGAG TGTGTGACAG CGGCCCTTGT AAGTGTGTAC
CCGGCATCGG ACGGGAAGCG TTACTTGCAG ATCGAGAAGT TCGGGCAACA GATTCGTTCC
AAAAGTAAGT TCCCGGAGCC AGACGGGGAC GTTCCGCTAA CATCTGTTAG CAATTGCGAA
CAACAGAAAA CAGTTGATTC CAATTGTGCG CAGATGGAAG CAGATGTTGT CGAGGTCGGG
CAGCATCAAA ACTCGCCTGA TGACAGTTGC AAGCATGTGG AAACGGGTGC CTCACATTGT
GATCAGCACG CCGAGCCAGT TAAGAGCGAC TCTAAATTAG ATGGCGCTAA CATTCCGGCT
AAGAACGACT CTAAATTAGA ACTGTCTGAT ATGCTGGAAA ATCATGGTGT TATCACTTGC
AACGCATCTG ATAACAATTG CAAACAATTG TCGGCAACTG CTCACTTAGG CGTATGCGTA
TTCGGAGTCG AAGACGAAGG CGGAGACGGA TGCGATATGC GTGCGCAAGC CCACGCGCAC
CCGCCCGCGC GCGAGGACGG TGACGCCCCG CCTGACGGCG GCGCGGATCG CGTGGTTTCA
GCCGCTCGTT TCGGCGAATT CTACGCCGTG TATCCGAAAA AGGCGGCCAG AGCGGAAGCC
CTCAAGGCCT GGAAAGCCAA AAAACTGGAC CGCCTGGCGG ATGTGATCAT CGCCGACGTG
AAGCGCCGCC AGGTCGAGCA CCGTCCCTGG CTGGAGGGAT TTACCCCCAA TCCGGCGACC
TACCTCCGGG GAGAACGCTG GACCGACGAG ATCGAACCCG TCCGCAAAGC TCCAGCTTCA
GCTTCAGCTT CGGCGGTGTC CCTGTCGGAC GACATCGCCC AGACCCTGCA CAGTTTGCCG
AGCCTGCAGG GGCTGGAGCA CCTGTCGAAA CACGGCAGGG ATACCGCCTT GGCCGCTCAG
GAATGGATCC GGATGCGCAG GGCTCGCAAT GGGGGTGACC TGTGA
 
Protein sequence
MPIRLIRDGI LTSEPVCSLS WPSEVLYRRL MSVVDDYGRF HANPRLVRAA CYPLQIDKVS 
DADIGKWLTE CVTAALVSVY PASDGKRYLQ IEKFGQQIRS KSKFPEPDGD VPLTSVSNCE
QQKTVDSNCA QMEADVVEVG QHQNSPDDSC KHVETGASHC DQHAEPVKSD SKLDGANIPA
KNDSKLELSD MLENHGVITC NASDNNCKQL SATAHLGVCV FGVEDEGGDG CDMRAQAHAH
PPAREDGDAP PDGGADRVVS AARFGEFYAV YPKKAARAEA LKAWKAKKLD RLADVIIADV
KRRQVEHRPW LEGFTPNPAT YLRGERWTDE IEPVRKAPAS ASASAVSLSD DIAQTLHSLP
SLQGLEHLSK HGRDTALAAQ EWIRMRRARN GGDL