| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0920 |
|---|
| Symbol | |
|---|
| ID | 7135273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 834332 |
|---|
| End bp | 835702 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643529319 |
|---|
| Product | metal ion transporter, NRAMP family |
|---|
| Protein accession | YP_002425395 |
|---|
| Protein GI | 218667514 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.291485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCA TACCAGAACT TCACGGAGCC TCCAGCGAGG CGGATGTGTT GCAGCAATTG
CCCGAGGACG TGCGGGAGCG CATCAAGGAT CGCTGGCGGA TTTATCAACT CCGCCATCAT
CCCTCCTGGT GGCGGAGGCT GACGCTGTTT TTGAGCCTGA TCGGGCCGGG TATCCTGGTG
ATGATCGCCG ACAACGATGC CGGAGGCGTG ATTACCTATG CCCAGACCGG AGCGATGTAT
GGTATCGGTT TCTTCGTTCC CTTCCTGCTG CTCATGATCC CGGTGGCCTA TGTGGTGCAG
GAGATGACCG TGCGTCTTGG CGCGGTGACT CACCGGGGAC ATGCCGAGAT GATCTGGGGG
CGTTATGGCG CTTTCTGGGG GGTGTTTTCG CTGCTGGATC TGACGGTGGC GAATATCCTG
ACCCTGGTGA CGGAGTTTAT CGGTATCCGG GTCGGTATGA GCGTGTTTTC TGTGCCGCCG
GTTCTTTCGG TCGCTGTGGC CTGGACCTTT CTCGCCGGGA CCATGATCTT TCTGCATTAT
AACACCTGGG AGCGGCTGGC ATTGTGGATT GCCGCGGGCA ATATCGTATT TGTGCCCCTG
GCTATCGCGG CGCACCCGGA CTGGGGCCAG GTTATTGCTG CGGTGGGCAA CTGGCACATT
CCGGTGGGGA CTGCGGTAGG CGCCTTTACC TATGTCGTAC TCGCCAATCT CGGAACGACG
ATCGCGCCGT GGATGCTCTT TTTTCAGCAG TCCTCGGTGG TCGACAAGGG CCTTACGGTC
AATGACATCC CCAGTGGCCA GGCCGATACC GCCTTCGGAA GCCTTTCCAT GGGTATCATC
GCCATTGCCA TCGTCATTTT GACGGGTACT CTGGCGTATG GGCACCTCAA TACCGCCCAG
TTTGACATCC AGGCGATCCT CCATCTGTTA CGAGAGAGCA GCCTCGGTAG TGTCGGGACC
GCATTGTTCG CTCTGGGCCT CGTCGAGTCG GGGCTGATTG CGGCCATTGC CATTACGGCA
AGTACTTCCT GGGCGGTGGG CGAGGCACTC AAGCTGCCCC GAAGTCTGAA CCTTCGGCCG
CAACGGGCCT TGCCCTTTTA TCTGTCCGGT ATCCTGAGCG CCGGGATGGC TGCTCTGGTG
GTGCTGATTC CTCAAATCCC ACTGGGTTTT CTGAACCTGA CCGTACAGGT AATCGCTTCC
ATATTCATGC CTGCGGCGAT GTTGTTTTTG CTCATGCTGC TGAATGATCG CGAGATCATG
GGGAGCTATG TGAACCGGCG CTGGCAAAAT TATTCAGCAT TCGCCATCGT TGGTTTCCTT
ATTCTGGCCA ATGCCGTTTA TGGCTATACC GTCGTCTTCC CGTCCGCCTG A
|
|---|
| Protein sequence | MSVIPELHGA SSEADVLQQL PEDVRERIKD RWRIYQLRHH PSWWRRLTLF LSLIGPGILV
MIADNDAGGV ITYAQTGAMY GIGFFVPFLL LMIPVAYVVQ EMTVRLGAVT HRGHAEMIWG
RYGAFWGVFS LLDLTVANIL TLVTEFIGIR VGMSVFSVPP VLSVAVAWTF LAGTMIFLHY
NTWERLALWI AAGNIVFVPL AIAAHPDWGQ VIAAVGNWHI PVGTAVGAFT YVVLANLGTT
IAPWMLFFQQ SSVVDKGLTV NDIPSGQADT AFGSLSMGII AIAIVILTGT LAYGHLNTAQ
FDIQAILHLL RESSLGSVGT ALFALGLVES GLIAAIAITA STSWAVGEAL KLPRSLNLRP
QRALPFYLSG ILSAGMAALV VLIPQIPLGF LNLTVQVIAS IFMPAAMLFL LMLLNDREIM
GSYVNRRWQN YSAFAIVGFL ILANAVYGYT VVFPSA
|
|---|
| |