Gene AFE_0853 details

Gene Information

• Locus tag: AFE_0853
• Symbol: uvrC
• ID: 7134511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 778958
• End bp: 780784
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643529259
• Product: excinuclease ABC, C subunit
• Protein accession: YP_002425340
• Protein GI: 218667420
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACAGAG CCTTCGTTCC CGGAGAGTTT CTGCGGACGT TGACCAGCCA GCCCGGTATT 
TATCAGATGT TCGGCCAGGG CAGTCGCCTG CTCTATGTGG GTAAAGCCCG CAATCTCCGG 
CGCCGCGTGA GCTCCTATTT TCAGAAGCAG CGCCATACGC CAAAAACGCT GGCGATGTTG 
GCGCAGGTAA CGCGGGTGGA GGTGGTGGTC ACCCACACAG AGACGGAAGC GCTGGTGCTG 
GAGGCGAATC TGATCAAGCG CCACCACCCG CCTTACAATA TCCTGCTGCG CGATGACAAG 
AGTTACCCCT ATCTGTTCAT AGAAACCGGT CATGGCACGC CGCGCATGAG TTTGCACCGG 
GGGGCGCAGA AGGGCAAAGG GCACTACTTC GGTCCGTATC CGGCCGTTAC TGCGTTACGC 
GAGAGTATGG TGCTATTACA GAAAGCCTTT CGATTGCGGA CCTGTGAGGA TCATACTTTT 
CACCACCGCA GCCGGGCTTG TTTGCAGTTC CAGATTCGTC GTTGCAGCGG CCCTTGTGTT 
GGGCATATCA GCGGGGAGGA TTACGCGCGG GATGTGGCGG ACACGATTCG CTTTCTGGAA 
GGAAAGAGCG ACGAAGCGAT TCGCAGTCTG GGGGAGCGTA TGCAAGCGGC GGCTGAGCAA 
CTGGATTTCG AGGAGGCAGC GCGACGCCGT GACCAGATCG CCGCGTTGTC CAAGATTCAG 
GAGCGTCAGT ACGTGGCGCA GGCGGGTGGC GGCGATTTTG ATGTGCTGGC GGCAGCACAA 
GAGAATGGAC AGTGGGTGGT GTACGTCAGT TTTATCCGCA ATGGACGGCA GTTGGGTGGG 
CGCTCCGTTT TTCCGCGGCA TACCGAAGAA GTGCGTGCGC CGGACGTGCT CGCTGCCTTT 
CTCATGCAGT TCTACAGCGA TAAAGAGGTG CCGGGGAATC TGCTGGTCAA TGTGCTGCCG 
CGTTCACCGA CCTCCCTGGC GGAGGCGCTG GGCAGCGAAG CCGGGCACAG GGTCATGATC 
GATCAGCCCC AGCGCGGTCC ACGCAAGCGC TGGATGGCGT TAGCGCTGAC CAACGCCATG 
GGGGCGTTGC GCCAGAGGAC GCAGACGGCC GGCGCGGGAC GGCGGCGCAT GCTCCTGTTG 
CAGGAGCTCT TTCAACTCCC GGAGATACCG CAGCGAGTAG AGTGTTTTGA CATCAGTCAT 
ACCCGAGGCG AGGTGGCTGT GGCATCTTGT GTGGTTTTCG GTGACGATGG GGCACTGAAG 
AACGAATACC GCCGCTTCAA TATTCGCGAT ATCCGGGGCG GCGACGATTA CGCGGCTATG 
GAGCAGGCCG TCCATCGCCG CTATGGGCGG CTGCAGAAAG AGGGCCTGGC CTTGCCGGAG 
ATCGTCTTCA TTGACGGTGG TGCCGGACAG GTGGCTCGTG CGCAGGCGGC TCTGGACGCA 
TTGGAGATCG GTTGCATCCA GTTGTGCGGG GTGGCGAAGG GGACGACGCG GCGCCCAGGG 
CTGGAGATGC TGCATATCCC CGGGTGGGCG GTCCCGCGGC AATTGGACGA CGATGATCCG 
GCACTGCTGG TAATTCAGGA AATCCGCGAT GAAGCCCATC GTTTTGCCAT TACCGGTCAC 
CGCGCGCGCC GCGGCAAAGC ACGGCAGGAA TCCGATCTGG ATGGCATCTC CGGGATCGGG 
CCGAAACGGC GGGTGGCGTT GTTACGCGCA TTTGGCGGCT TACGCGGTAT TCGTGACGCC 
GGTATGGAGG ATTTGCAGCG CGTTGAGGGT ATCCATCTGG AGCTCGCGCA GCGGATATAT 
GATTTCTTTC ACGTAGGACG TGCCTGA 

 

Protein sequence

MDRAFVPGEF LRTLTSQPGI YQMFGQGSRL LYVGKARNLR RRVSSYFQKQ RHTPKTLAML 
AQVTRVEVVV THTETEALVL EANLIKRHHP PYNILLRDDK SYPYLFIETG HGTPRMSLHR 
GAQKGKGHYF GPYPAVTALR ESMVLLQKAF RLRTCEDHTF HHRSRACLQF QIRRCSGPCV 
GHISGEDYAR DVADTIRFLE GKSDEAIRSL GERMQAAAEQ LDFEEAARRR DQIAALSKIQ 
ERQYVAQAGG GDFDVLAAAQ ENGQWVVYVS FIRNGRQLGG RSVFPRHTEE VRAPDVLAAF 
LMQFYSDKEV PGNLLVNVLP RSPTSLAEAL GSEAGHRVMI DQPQRGPRKR WMALALTNAM 
GALRQRTQTA GAGRRRMLLL QELFQLPEIP QRVECFDISH TRGEVAVASC VVFGDDGALK 
NEYRRFNIRD IRGGDDYAAM EQAVHRRYGR LQKEGLALPE IVFIDGGAGQ VARAQAALDA 
LEIGCIQLCG VAKGTTRRPG LEMLHIPGWA VPRQLDDDDP ALLVIQEIRD EAHRFAITGH 
RARRGKARQE SDLDGISGIG PKRRVALLRA FGGLRGIRDA GMEDLQRVEG IHLELAQRIY 
DFFHVGRA