| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0739 |
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| Symbol | |
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| ID | 7137221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 668027 |
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| End bp | 669091 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643529145 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_002425227 |
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| Protein GI | 218667016 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.506498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCGTC TACCAAGTCC TCCTTTGCTC GGCCTGGATA TCAGTCCGGA CGCGGTAAAA
CTCGTGGAAC TCTCGAAGCC CCGGGGGGGA ATTCGCGTCG AACACGCCGA CTCCGAAGCG
CTTCCGCCAG GCGCCGTCAA TGATCGCGAC ATCCTGGACG CGGAGGCAGT CAGGCGCGCA
GTGCGCGCCA TTCTGGAACG ATCCCGCATC CGCACCAAGG CCGTGGCGAC CGCCTTACCC
GCCAATGCCG CCATCGTCAA GGTCATAGCA CTTCCGGAAG ACCTCGATGA AGTGGGTATG
GAGGAGCAGA TCCGCTTCGA AAGCGGCCAG TATATTCCCT ACAGCATTGA TGCCGTCAAT
TTCGATTTCG CGGTACTCGG GCCGGACGCC AACAGAAGGG GGTATAACCA TATATTGTTG
GTGGCGTGCA AAAAAGAAGC CGTCGAAGAC CGCGCAGCGG TGCTGGAAGA GGCCGGCCTC
AAGCCCAAAA TTGTCGACGT CAAGCCCTTT GCGCTCTGGT TGTTATATGA GCACCTTGCC
AGTGTGTCCC CACCACAGCG CAATATTCCG GGCAGTGCGG TCATTCTGGT GGAGATGGGT
AGCATCACCA CGAACATTTA CGCTTTTCAG GAAGGCCACC CGGTCTACTC CCGAGAACAT
AATTTCGGTC TCAGTCGTCT GATCGAAGAG ATCCAGCGCC GCTACGACCT CGCCCTCAAC
GATGCGCAAC GCATGGAGCG CTTCGGCGGT CTACCGCCGG ACTATGGGCG TGATGTGCTC
AGCCCCTTTA CCCGGAGCAT GGCGCAGGAA TTGTTTCGCT CTCTGGACTT CTTTCAGGCC
AGCATGCCGG ATATTCCGGC GGGATCGGTG CATCTCTTTG GTGTCGGAGC CCGGATTCCG
CAACTTGGCG AACAGTTGCG CCAGCTCGTG AACTTTCCGG TCTACGTGCC AGATCCTTTT
GCGGGCATGG AAATGGCCCC TCAGATCAGT CGTCGTTTCA TGGATGCAGA CCGGTCATCC
CTGGCTGTTG CCTGCGGGTT GGCGCTAAGG AGGGTTTCTG CATGA
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| Protein sequence | MLRLPSPPLL GLDISPDAVK LVELSKPRGG IRVEHADSEA LPPGAVNDRD ILDAEAVRRA
VRAILERSRI RTKAVATALP ANAAIVKVIA LPEDLDEVGM EEQIRFESGQ YIPYSIDAVN
FDFAVLGPDA NRRGYNHILL VACKKEAVED RAAVLEEAGL KPKIVDVKPF ALWLLYEHLA
SVSPPQRNIP GSAVILVEMG SITTNIYAFQ EGHPVYSREH NFGLSRLIEE IQRRYDLALN
DAQRMERFGG LPPDYGRDVL SPFTRSMAQE LFRSLDFFQA SMPDIPAGSV HLFGVGARIP
QLGEQLRQLV NFPVYVPDPF AGMEMAPQIS RRFMDADRSS LAVACGLALR RVSA
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