| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0716 |
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| Symbol | hypE |
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| ID | 7135191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 642389 |
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| End bp | 643447 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643529122 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_002425204 |
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| Protein GI | 218666891 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.442056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAA ATCCGCAACC GCGCGTCAAA AGACCCCATG GTGATGTGGT CAATCTTTCC
CATGGCAGTG GTGGCAAGGC CATGCGGGAT CTGATCGAAG GATTGATTCT GCCCGCCCTG
GGTGCCTCCA GTGCCACGCC GCTGGAGGAT CAGGCCCGCA TCGATGTACC GGAAGTCCTT
GGGAACGGTG GCCGGATCGC CTTCACCACG GATTCCTACG TCGTCGATCC CCTCAGCTTT
CCGGGCGGCG ACATCGGCAC GCTGGCCATC AATGGTACCG TAAACGATCT GGCGGTGGGC
GGCGCACGGC CCATCGTGCT GAGTTGCTCC CTGATCCTGG AAGAGGGTCT GCCCTTCACC
ATTCTGGAGA AGATGATGTG CAGCATGGCG CGGGCGGCAC AGGCGGCGCG GGTCAGGATC
GTCACGGGGG ACACCAAAGT GGTGCCCCGG GGCAGCGCGG ACAAGCTGTT CATCAACACC
GCCGGCATCG GAATCATCCC GAAGGGCGTC CATCTGGAGA TCGCCCGGAT CCGACCGGGT
GACCAACTGC TGTTGAATGG CCACTTGGGG GATCATGGCG CCGCCATTTT GAAGGCGCGC
GGCGATCTGG CCCTGGACGC GGATGTGGAG AGCGATTGCC AGCCCCTGCA CGGGATTATC
GCCGCACTGC TGGCGGCGGC GCCGGGCACC CGATGCATCC GCGACGTGAC CCGCGGCGGG
CTGGCCACGG TGCTCAACGA ATTTGCCGGA GGGGCTGGCG TGGGTATGCG CATCGTGGAG
GATAGCATTC CCGTCCGCCC CGTGGTCAGA GGCATCTGCG AAGTGCTCGG CCTGGATCCC
CTCTATCTGG CCAACGAAGG CAAACTCCTT GCGGTGGTGC CAAAGGAAGA GGCCGGGGCT
GCCCTGGAGG CGCTGCGCTC CTGCCCGGAA GGCACCTACG CCGGGATGAT CGGCGAGGTG
CTCGCGGGGC CTCCCGGAAG GGTCGTGCTG AGCAGCCATT TCGGCGGTGA ACGCATCGTC
GATATGCTGG TGGGCGAACA GTTGCCGCGA ATCTGTTAG
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| Protein sequence | MAANPQPRVK RPHGDVVNLS HGSGGKAMRD LIEGLILPAL GASSATPLED QARIDVPEVL
GNGGRIAFTT DSYVVDPLSF PGGDIGTLAI NGTVNDLAVG GARPIVLSCS LILEEGLPFT
ILEKMMCSMA RAAQAARVRI VTGDTKVVPR GSADKLFINT AGIGIIPKGV HLEIARIRPG
DQLLLNGHLG DHGAAILKAR GDLALDADVE SDCQPLHGII AALLAAAPGT RCIRDVTRGG
LATVLNEFAG GAGVGMRIVE DSIPVRPVVR GICEVLGLDP LYLANEGKLL AVVPKEEAGA
ALEALRSCPE GTYAGMIGEV LAGPPGRVVL SSHFGGERIV DMLVGEQLPR IC
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