Gene AFE_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0714 
SymbolgmhA 
ID7134729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp640565 
End bp641260 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID643529120 
Productphosphoheptose isomerase 
Protein accessionYP_002425202 
Protein GI218667775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCTC TGCAGGAGCT CTATCCTTTT CTGCACGGTC AAGCCAAAAA TCCGCAGCGG 
GAAAAGATGG CGCTGCTGGA GTCTGTGCGG CAGAAATCCG CCGAAAGCCG GAACGTCAAG 
GCGCAGTTTT TTGCCGCGCA TGCGGAGGCG CTGGTTTCCA TGGCGGCGGC CCTGGCTGCG 
GTTTATCAGA GAGGCGGCAT GCTCTACACC ATGGGTAACG GCGGCTCCTC CTGTGATGCG 
GACCACTTGG CGGTGGAGTT CATGCATCCC GTTACCACGG GCCGCCCGGC CCTGGCGGCG 
CACAGTCTGG TGAGTGACCG GGCCATGCTG ACCGCTGTCG GTAATGACGT GGGTTTTCAG 
CATGTGTTTT TACGGCAACT GACGGCCCTG GCAAGATCGG GGGATGCGCT GTTCGGCTTT 
TCGACCAGTG GCAACTCCGC CAATCTCATG GCCGCCTACC GGAAGGCCCG GGAAACCGGC 
ATGGTGACCT TCGGCCTTGC CGGCATGCAG GGGGGTGAGA TGCAGGCAAG CGGCTTGGTG 
GACCACCTCT TGGTGGTGGC GACGGACAGC ATCCACCGTA TCCAGGAATG CCACGTCACG 
ACCTTTCACA TACTCTGGGA CCTGGTGCAT ACCATCCTGG CAGACCGGCG CGGAGACTTG 
CGGGCGGAGG TAACCGAAGA TGCGTTACGT GGATGA
 
Protein sequence
MDPLQELYPF LHGQAKNPQR EKMALLESVR QKSAESRNVK AQFFAAHAEA LVSMAAALAA 
VYQRGGMLYT MGNGGSSCDA DHLAVEFMHP VTTGRPALAA HSLVSDRAML TAVGNDVGFQ 
HVFLRQLTAL ARSGDALFGF STSGNSANLM AAYRKARETG MVTFGLAGMQ GGEMQASGLV 
DHLLVVATDS IHRIQECHVT TFHILWDLVH TILADRRGDL RAEVTEDALR G