| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0713 |
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| Symbol | hypC-1 |
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| ID | 7135807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 640253 |
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| End bp | 640546 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643529119 |
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| Product | hydrogenase assembly chaperone HypC |
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| Protein accession | YP_002425201 |
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| Protein GI | 218667180 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0298] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.487958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGTCTAG GTATTCCGGG TCAGATCACG AGAATCATCA GTGCGCGTGA ACGAAGAGCG
GAGGTGGCAA TCAACGGGGT ACGGCGGGAG GTCAATATCG CCTGCATTAC CGATGCGGGG
CACCCCGCGG AGTCCTGTGT CGGTGACTGG GTGCTGGTGC ATGTGGGTTT TGCCATGAGC
CGCATCAGCG CGGAGGAGGC AGCCCTGACG CTGGATGTGC TGACGCAACT GGGTGAAGCT
CAACTGGAAA TGGATCGTAT GCGGGAGTCC GCGCCAACAG GTCCCATGGC GTAA
|
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| Protein sequence | MCLGIPGQIT RIISARERRA EVAINGVRRE VNIACITDAG HPAESCVGDW VLVHVGFAMS
RISAEEAALT LDVLTQLGEA QLEMDRMRES APTGPMA
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