Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0701 |
Symbol | hybA |
ID | 7134119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 630000 |
End bp | 630962 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529107 |
Product | hydrogenase-2, small subunit |
Protein accession | YP_002425189 |
Protein GI | 218667209 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.111194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACG TGCTTTGGCT CCAGGGAGGA GCCTGTTCTG GAAATACCAT GTCTTTTCTC AATGCGGAGG AGCCGAGCGC CTGCGATCTG GTGACGGATT TTGGTATCAA CGTGCTCTGG CAGCCCTCTC TCGGGATGGA CATGGGGGAC AATGTTCAGA AGTTGCTTCG GGATTGTGTG TCTGGGGCAA TTCCCCTGGA TATATTCGTT TTCGAGGGTA CCGTGGTCAA CGCCCCCAAT GGTACGGGTA CCTGGAATCG CTTTGCCGGT CGTCCGATGA AAGACTGGGT GAAGGAGTTA TCAGGTGCAG CCCAGTTCGT GGTGGCGTTG GGAGATTGCG CGACATGGGG AGGCATCCCG GCGACCGCCC CGAACCCCAG TGATTCCAAG GGACTTCAGT TCCTCAAAAA GCAGCATGGC GGTTTCCTGG GGGCGGGCTT CAAGAGCAAG GCCGGGCTTC CTGTCATCAA TATCCCCGGT TGTCCCGCCC ATCCGGACTG GGTCACCCAA GTACTGGTGG CGGTGGCGAC AGGCCGCGCC GGAGAACTGG AACTGGATGA TCTGCAGCGT CCAAAGACGT TTTTCAAGAG CTTCACCCAG ACGGGATGTA CCCGCAACAT GCACTTTGCC TACAAGGTTT CCGCCACGGA ATTCGGGCAG CGAAAGGGCT GTCTCTTTTA TGACCTGGGC TGCCGTGGCC CGATGACCCA TTCGCCCTGT AACCGCATCC TGTGGAACCG GCAGTCGTCC AAAACCCGGG CGGGGATGCC CTGTCTGGGT TGTACCGAAC CGGAGTTCCC CTTCTTCGAT CTGGCGCCGG GCAGTGTGTT CAAAACCCAG ACCATGATGG GGGTGCCGAA AGACCTGCCA GAGGGTGTGG ACAAATCCGC TTATATCAAA CTTACGGCAG CCGCCAAGAG TGCTTCGCCG GCCTGGGCCG AAAAAGACAT CTTCGTGGTC TGA
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Protein sequence | MANVLWLQGG ACSGNTMSFL NAEEPSACDL VTDFGINVLW QPSLGMDMGD NVQKLLRDCV SGAIPLDIFV FEGTVVNAPN GTGTWNRFAG RPMKDWVKEL SGAAQFVVAL GDCATWGGIP ATAPNPSDSK GLQFLKKQHG GFLGAGFKSK AGLPVINIPG CPAHPDWVTQ VLVAVATGRA GELELDDLQR PKTFFKSFTQ TGCTRNMHFA YKVSATEFGQ RKGCLFYDLG CRGPMTHSPC NRILWNRQSS KTRAGMPCLG CTEPEFPFFD LAPGSVFKTQ TMMGVPKDLP EGVDKSAYIK LTAAAKSASP AWAEKDIFVV
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