Gene AFE_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0653 
Symbol 
ID7135562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp583361 
End bp584587 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content62% 
IMG OID643529059 
Producthypothetical protein 
Protein accessionYP_002425142 
Protein GI218665553 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCATCCT CTGGCTGGCG AGCACGGCCA CCATGGTGCT GGCCGGACGG CGGGCGGTCC 
GGCATACCTC CGCGGTGCTG CGCGATGATT AGTCATTTAT GGTCGGGATC ACCGCGTAAA
GGGATATGTT CTGGTCTACT GGTACTGTGC TGCGGGCTCT GTGGACCGGC GCAGGCTGAA
TCCAGTCTGC CGGGGACGCC CCTGCCTTTA CAGCCCACCC CGGATGTGAA GGTCACCCCG
CAGCACCCCA TGCAATTCCC CAACGCATTG GGCAGCCACC CGGATTTCCC CATTGAATGG
TGGTACGTAA CGGGCTGGCT GCATAACGCA TCGGGAAAAC CGCTGGGATT TCAGGTCACC
TTTTTCCGGG TCCGGGCCCC TGAGGTCTGG GCAAACCCCA GTGCATTCAA TCCCGGTGAA
CTGCTTTTTG CCGAGGCGGC GTTGAGCGAT CCCCGCATCG GACATCTGCT CACCGCGCAA
CGGGCCGCAC GGGCAGATCT CGGATTGGCA GGGGCGGATC GAAACCATAC CGATGTCTGG
ATTCGCCATT GGTATCTGCG CCAGCAAGGG CGGGCTTACG AAGCCCACAT CGATGGCAAA
GGCATCCGTT ATCGACTACG ATTCACAACA ACCCAACCGG CACTGCTCGA AGGTCTCCAG
GGCATCAGCC GGAAAGGCCC AGACCCGAAG AATGCCAGCT ACTACTACAG CCTTCCACAT
CTGAAGGTCA GCGGGACGGT GGACATCAAA GGACGGCGTG AGCCCGTCAG CGGGGAGGCG
TGGCTGGATC ACGAATGGTC GGCGGCGTAC CTGCCCAAAC AGGCCGTCGG TTGGGATTGG
CTGGGGGTCA ATCTGAAGGA TGGCGGTGCC CTCATGGTCT TCATGATGCG CCGCGCCGAC
GGTGCGCCCC TCTGGCTGGC AGCTACAGAG CGCAATGCCC AGGGCCAGGT ACACTACATT
CCGGGCAAAG ACATCCGCAT GCAGCCCACG GGCTGGTGGC GGTCGCCGCA AACCGGTATA
CGCTACCCCG TGCGCTGGCA GATGCAGGTG GGAAACCTGC ATTTCGCTAT CGTCCCGCTC
ATGGACAATC AGGAATTCGA CGCCAGCCGC AGCAGCGGCA CCGTCTACTG GGAAGGAGCG
GTGCGCGCCG TGACGGGTCG ACAGACCGCA GGGAGAGGAT ATCTGGAACT CACCGGCTAT
GGCGGCCGTC TGGCTCTGGG TCAATGA
 
Protein sequence
MPSSGWRARP PWCWPDGGRS GIPPRCCAMI SHLWSGSPRK GICSGLLVLC CGLCGPAQAE 
SSLPGTPLPL QPTPDVKVTP QHPMQFPNAL GSHPDFPIEW WYVTGWLHNA SGKPLGFQVT
FFRVRAPEVW ANPSAFNPGE LLFAEAALSD PRIGHLLTAQ RAARADLGLA GADRNHTDVW
IRHWYLRQQG RAYEAHIDGK GIRYRLRFTT TQPALLEGLQ GISRKGPDPK NASYYYSLPH
LKVSGTVDIK GRREPVSGEA WLDHEWSAAY LPKQAVGWDW LGVNLKDGGA LMVFMMRRAD
GAPLWLAATE RNAQGQVHYI PGKDIRMQPT GWWRSPQTGI RYPVRWQMQV GNLHFAIVPL
MDNQEFDASR SSGTVYWEGA VRAVTGRQTA GRGYLELTGY GGRLALGQ