Gene AFE_0640 details

Gene Information

• Locus tag: AFE_0640
• Symbol: carA
• ID: 7134835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 573147
• End bp: 574289
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643529046
• Product: carbamoyl-phosphate synthase, small subunit
• Protein accession: YP_002425129
• Protein GI: 218667825
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0505] Carbamoylphosphate synthase small subunit
• TIGRFAM ID: [TIGR01368] carbamoyl-phosphate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGCGG TCTTGGCATT GGCAGACGGC AGCATCTATC GCGGTATAGG CTTTGGTGCC 
ACCGGATTGG CAGCAGGTGA AATCTGTTTT AACACCGCCA TGAGTGGCTA CCAGGAGATC 
CTTTCTGATC CCTCGTATCA GGGACAGATC ATCACGCTCA CTTATCCCCA TATCGGCAAT 
ACCGGGGTCA ACCCGGAGGA CATGGAAGGT ACCCGGATAT TCTGCTCCGC TCTCGTCGTG 
CGCAATCTGC CACGGCAACC CAGCAGTTGG CGCAGCACCC AGGACCTGGC CTCCTTCCTG 
CAGACCCATC GAATTCCCGG CATCGCGGGA ATCGACACCC GCGCTCTGAC CCGCAGACTG 
CGGGATAGCG GCGCTCAGAA TGCTGCCGTC CTCGTCGGAG AAGCGGCCAG CGAAGAGAAG 
GCCCTGGCTG CGGCGCGCGC TTTCCCAGGC CTCATCGGCC GTGATCTGGT GCAGGATGTG 
GGCTGCCGGG AGGCATACAC CTGGGATCTC GCCAGCGGCA CCCCCGAACA GGGCTATCAC 
GCGCAGGCCG TCACCCGGAC ACAGTGCCAT GTGGTGGTCT ACGATTTCGG CACCAAACGG 
AATATCCTGC GCCTGCTGGC GGATCGGGCC TGCCGAATCA CGGTGGTGCC GGCCCGCACC 
GCGGCCGCCG AGGTGATCGC CCTGCGCCCG GACGGCATAC TCTTCTCCAA TGGTCCCGGT 
GACCCAGCGG CCCTCGGCTA TGCGGAAGAG GCCATGCGCC AAGTCATCGC CACGGGTATT 
CCCACCTTCG GACTCTGTCT GGGGCATCAG TTGCTGGGAC GGGCCCTGGG CGCCAAAACC 
GTCAAGATGA AGTTCGGGCA CCACGGTGCC AACCATCCGG TCAAAGACCT GCGCAGCGGT 
CGGGTGTTGA TCACCAGTCA GAACCACGGT TTCGCGGTGG ACGCGGACAC CCTGCCGGAG 
TGCCTGGTGG CGACCCATGC CTCACTGTTC GACGGCAGCC TGCAGGGCAT GGCGCATCGG 
GAGCTGCCCG TATTTTCCTT TCAGGGCCAC CCTGAGGCCG GACCCGGGCC CCACGACGCC 
CGTGCAATTT TTGACGACTT CGTTCACGCC ATGAACCAGT ACGGAGGCCG TCACCATGCC 
TAA 

 

Protein sequence

MQAVLALADG SIYRGIGFGA TGLAAGEICF NTAMSGYQEI LSDPSYQGQI ITLTYPHIGN 
TGVNPEDMEG TRIFCSALVV RNLPRQPSSW RSTQDLASFL QTHRIPGIAG IDTRALTRRL 
RDSGAQNAAV LVGEAASEEK ALAAARAFPG LIGRDLVQDV GCREAYTWDL ASGTPEQGYH 
AQAVTRTQCH VVVYDFGTKR NILRLLADRA CRITVVPART AAAEVIALRP DGILFSNGPG 
DPAALGYAEE AMRQVIATGI PTFGLCLGHQ LLGRALGAKT VKMKFGHHGA NHPVKDLRSG 
RVLITSQNHG FAVDADTLPE CLVATHASLF DGSLQGMAHR ELPVFSFQGH PEAGPGPHDA 
RAIFDDFVHA MNQYGGRHHA