Gene AFE_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0593 
Symbol 
ID7135041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp526958 
End bp527470 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content69% 
IMG OID643528999 
Productchorismate lyase family protein 
Protein accessionYP_002425082 
Protein GI218665901 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCA AGCCCCCTGC CCTGCGCCAC GCTCCCCGCG CAATCTGGCC CTGGCTCATC 
CTGCCTGCCT CCCTCACCGC CGCTCTGCAA CGGGCTTATG GAAAACCGCA CACCGTGCGG
GCGCTGCTGC TGGATAGCGG ACGCGCGAAC CCCTCGCCGG TCGAGCGCCG CATTTTGTGC
ATGCGCCGCG GCGAGCGGAT TTTCTGGCGC GAGGTGCTCC TGCACGGTGG TGACCCGGCA
TACCCGGCAC TCTGGGCGCG CACCACCATT CCTTTGCGAG GACTGCGCCA CGGTCTGTTA
CCTCTGACCC GCCATGGCAC GCGCCCCATC GGCAACACCT TATTCCGCCA CCGCCGGTTG
CGGCGCTCCC CGATTCAGGC CGACAGCCGG CCGCGGTTCG GCCCGCGGCG CTGGCAGCGG
CGCTCCGTAT TGCGGCGCGG CAGCGCAGGT GTGTTGGTAG AAGAGCATTT TCTGCCAGAT
CTGCCCTGCT GGGCAGGGCG GGGACGACGC TGA
 
Protein sequence
MAGKPPALRH APRAIWPWLI LPASLTAALQ RAYGKPHTVR ALLLDSGRAN PSPVERRILC 
MRRGERIFWR EVLLHGGDPA YPALWARTTI PLRGLRHGLL PLTRHGTRPI GNTLFRHRRL
RRSPIQADSR PRFGPRRWQR RSVLRRGSAG VLVEEHFLPD LPCWAGRGRR