Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0593 |
Symbol | |
ID | 7135041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 526958 |
End bp | 527470 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643528999 |
Product | chorismate lyase family protein |
Protein accession | YP_002425082 |
Protein GI | 218665901 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGGCA AGCCCCCTGC CCTGCGCCAC GCTCCCCGCG CAATCTGGCC CTGGCTCATC CTGCCTGCCT CCCTCACCGC CGCTCTGCAA CGGGCTTATG GAAAACCGCA CACCGTGCGG GCGCTGCTGC TGGATAGCGG ACGCGCGAAC CCCTCGCCGG TCGAGCGCCG CATTTTGTGC ATGCGCCGCG GCGAGCGGAT TTTCTGGCGC GAGGTGCTCC TGCACGGTGG TGACCCGGCA TACCCGGCAC TCTGGGCGCG CACCACCATT CCTTTGCGAG GACTGCGCCA CGGTCTGTTA CCTCTGACCC GCCATGGCAC GCGCCCCATC GGCAACACCT TATTCCGCCA CCGCCGGTTG CGGCGCTCCC CGATTCAGGC CGACAGCCGG CCGCGGTTCG GCCCGCGGCG CTGGCAGCGG CGCTCCGTAT TGCGGCGCGG CAGCGCAGGT GTGTTGGTAG AAGAGCATTT TCTGCCAGAT CTGCCCTGCT GGGCAGGGCG GGGACGACGC TGA
|
Protein sequence | MAGKPPALRH APRAIWPWLI LPASLTAALQ RAYGKPHTVR ALLLDSGRAN PSPVERRILC MRRGERIFWR EVLLHGGDPA YPALWARTTI PLRGLRHGLL PLTRHGTRPI GNTLFRHRRL RRSPIQADSR PRFGPRRWQR RSVLRRGSAG VLVEEHFLPD LPCWAGRGRR
|
| |