| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0520 |
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| Symbol | clpA |
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| ID | 7137291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 450782 |
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| End bp | 453040 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643528927 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | YP_002425012 |
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| Protein GI | 218666632 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA AACCCCTGGA ACAGTCCATC AATCAGGCCT TCCAGATTGC CCGCCAGTAC
GGACATGAAT ACGCCTCCGT GGAACATCTC TTACTGGCCC TGCTGGACAA CCCCGACGGT
ATGGATGTGC TCAGCGCCTG TGGCGCCGAC CGCACCCATC TGTCTGTGGA ACTACGGCAG
TTTCTGGAAC GCAAAGTGCC CGCCATGGGT CCGGCGGGCA CCGTCAATAC CCAGCCGTCC
ATAGGTTTTC AGCGGGTCAT TCAGCGCGCT CTCTACCATG TGCAGTCGGC GGGTAAGGAT
GCGGTTTCGG GGGCTAACGT CATTGTCGCC ATCTTCGCCG AAAGGGAATC CCACGCTGTT
TATTTCCTAC AGAAAGAACA TGTGACAAGA CTCGATGTGG TCAATTTTCT GGCGCACGGC
GTGCGCAAGG ATGAAGTCAT GGATGAGGAA GAAGAGGAAG TCGAGGGTAC CACGGAAAAG
AAGGGAGACA GCAAGGACCC GCTCACAGCT TATGCGCGCA ACCTCAACGC CATGGCACGG
GCAGGACGGC TGGACCCGCT GATAGGACGC CAGGAGGAGT TGATCCGGGC CCTGCAGGTG
CTGGCACGGC GCCGGAAAAA CAACCCCCTC TTCGTCGGTG AACCAGGTGT CGGGAAAACC
GCCATCGTCG AGGGCCTTGC GCGTGCTGTT GTCGCCGGCA AAGTGCCGGA GATGCTGGAA
AACGCGACGA TTTATGCTCT GGATTTGGGG GCGTTGATCG CCGGATCCCG CTACCGGGGT
GACTTTGAAG AACGCCTGAA AGGGGTGCTG AAGGCGCTGC GCAAAAAACC CAACAGCATC
CTGTTCATCG ACGAGATTCA CACCCTGATC GGCGCCGGAG CCGCTTCGGG TGGCGCCATG
GATGCCTCCA ATCTGCTGAA GCCGGCTCTC GCCTCCGGTG AACTGAAATG TATCGGGGCG
ACCACTTATC AGGAGTTCCG CCAGTATTTT GAGAAGGATC GCGCGCTGAC TCGTCGCTTC
CAGAAAATTG ACGTGCCGGA GCCCTCTCAG GAAGAGTCCG TACAGATTTT GCGCGGACTG
AAGGGACAAT TTGAGCAGCA TCATGGCCTG CGTTATACCG ACACGGCGTT GCGCGCGGCG
GTGGAGCTGT CCGTCAAGCA CATCCACGAT CGCCATCTAC CCGACAAGGC CATTGATCTC
ATCGACGAGG TGGGCGCCGC GCAAGCGCTT TTGCCAGTCT CCCGACGCAA GAAGAGCATC
GGTGTGCACG ACATCGAGGA AATGGTCGCC CGGGTGGCCC GTATTCCGGG TAAGAGCGTC
TCTACCGATG ATCGTCAGGC CCTGAAGAAT CTGGAGCGGG ATCTGGGATT CGTCATCTTT
GGTCAGGAAA AGGCCATCCA CGAACTCTCC GCGGCCATCA AAATGGCACG GGCAGGCCTG
CGCCACCATG AAAAGCCGGT GGGGAGTTTT CTCTTCTCCG GCCCGACCGG CGTGGGTAAG
ACCGAGCTCA GCCGGCAGTT GGCCAGCCTG CTCGGCATTC CGCTACTGCG TTTCGACATG
AGTGAATACA TGGAACGGCA TACGGTGTCA CGACTCATCG GTGCACCGCC AGGATATGTC
GGGCATGATC AGGCTGGACA ACTGACGGAG GCGGTGAGCC GTAATCCACA TGCGGTGCTG
TTGTTGGATG AAATTGAGAA GGCACACCCG GATATCTTCA ATGTGCTCCT GCAAGTGATG
GATCACGGCA AGCTGACAGA TGCCGGCGGC CGCACGGTGG ACTTCCGCAA TGTGGTGCTC
ATTATGACCA CCAATGCGGG GGCTGAGGCG CGCGGCAAAG CGAATATTGG TTTCATGAAC
GCCCCCCAGA GTGATGGCGG ACAGGAAATG GAGACCATCC GCCGGGTCTT CGCACCGGAA
TTTCGCAACC GCCTGGATGC CGTCGTACCC TTCACACCGC TTTCTAAGGA GACGGTGCTA
CACGTGGTGG ATAAGTTCGT CATGGAACTG GACGAGCAGT TGCTGCAAAA GGGCTATAGC
CTGGAAATCA GCGCTGAACT ACGGCAATGG CTGGCGGACA AGGGCTACGA CCCGCAGATG
GGCGCCCGGC CGATGACGCG GATGATTCAG GAGCACCTGA AGAAGCCGCT GGCGGAGCAT
ATCCTCTTTG GCGACCTACC CAAGGGCACG CGAATCACTG CGCGCCTCGA GAACGGTGAG
GTGAAACTGG AAATACCGGT GCCCGTGCAT CAAGACTGA
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| Protein sequence | MIDKPLEQSI NQAFQIARQY GHEYASVEHL LLALLDNPDG MDVLSACGAD RTHLSVELRQ
FLERKVPAMG PAGTVNTQPS IGFQRVIQRA LYHVQSAGKD AVSGANVIVA IFAERESHAV
YFLQKEHVTR LDVVNFLAHG VRKDEVMDEE EEEVEGTTEK KGDSKDPLTA YARNLNAMAR
AGRLDPLIGR QEELIRALQV LARRRKNNPL FVGEPGVGKT AIVEGLARAV VAGKVPEMLE
NATIYALDLG ALIAGSRYRG DFEERLKGVL KALRKKPNSI LFIDEIHTLI GAGAASGGAM
DASNLLKPAL ASGELKCIGA TTYQEFRQYF EKDRALTRRF QKIDVPEPSQ EESVQILRGL
KGQFEQHHGL RYTDTALRAA VELSVKHIHD RHLPDKAIDL IDEVGAAQAL LPVSRRKKSI
GVHDIEEMVA RVARIPGKSV STDDRQALKN LERDLGFVIF GQEKAIHELS AAIKMARAGL
RHHEKPVGSF LFSGPTGVGK TELSRQLASL LGIPLLRFDM SEYMERHTVS RLIGAPPGYV
GHDQAGQLTE AVSRNPHAVL LLDEIEKAHP DIFNVLLQVM DHGKLTDAGG RTVDFRNVVL
IMTTNAGAEA RGKANIGFMN APQSDGGQEM ETIRRVFAPE FRNRLDAVVP FTPLSKETVL
HVVDKFVMEL DEQLLQKGYS LEISAELRQW LADKGYDPQM GARPMTRMIQ EHLKKPLAEH
ILFGDLPKGT RITARLENGE VKLEIPVPVH QD
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