Gene AFE_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0463 
Symbol 
ID7134153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp403957 
End bp404760 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID643528874 
Productformamidopyrimidine-DNA glycosylase, putative 
Protein accessionYP_002424959 
Protein GI218667882 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGT TGCCAGAAAT AGAACTGCTC AGACAAAAGC TGCGGCGCAA TATCCTGCAC 
AAGCGGGTCG GCGTCATGCA GATGCAGAAT GCCAAGGGCG AGGCACTTCC GGATGGTGCC
GGCATCAAAG ATGCCGCACT CAAAGGCAGG GCCATCACCG ACCTGCATCG CTACGGTCAA
TACCTTTTCC TGGAACTGGA TCGCAAGGAC ATCCTCGCCC TGCAGTTGGG TGGTGAGCTG
AGCGGCGAAC TCGAACGCGG CCCTGTTCAT GGGGAAGGCG GGGAAGAGCC GCGAGCGGCA
TTGGAGATAC AGATCAACGG CCAGCAGCGC CTGCGTTTTC AGGGGACCCA GTTGGGTAAC
CGCCTGCGCA TGCTGGACGA AAACAGCGAT GTGGACTTCC TCACCAAGCT CGGCCCTGAT
CCACTGATGG TGCATGGGGA AGGGCTTGGT ATATTGCGCG AGGCCCTGAG CCGTCGCCGC
AGCGCCCTGC GCAACATCCT GCTGGATGAT ACCTTCGCGC CGGGCATCGG CGGTATCTGG
GCGGATGAAA TCCTTTTTCA GGCCCGCCTG CGACCGGATC GCACCGCGAC CAGTCTCAGC
GAAGAAGAGC GCGAGCGTTT CCTGGAGCAG ATCCCCAAGG TGCTGGATCG CGCCGTGCGC
TGTCAGGCGA AGACCAACCT GCTGCCCAAG ACCTTCCTCA CCCGCCATCG GGAAGACGGG
CACTGCCCGA GTTGCGGCGG CGCGCTGGAG ACCCTTTCGG TGGGGGGTAA AAACGCGATG
CTCTGCCCAG CCTGCCAGTC TTGA
 
Protein sequence
MAELPEIELL RQKLRRNILH KRVGVMQMQN AKGEALPDGA GIKDAALKGR AITDLHRYGQ 
YLFLELDRKD ILALQLGGEL SGELERGPVH GEGGEEPRAA LEIQINGQQR LRFQGTQLGN
RLRMLDENSD VDFLTKLGPD PLMVHGEGLG ILREALSRRR SALRNILLDD TFAPGIGGIW
ADEILFQARL RPDRTATSLS EEERERFLEQ IPKVLDRAVR CQAKTNLLPK TFLTRHREDG
HCPSCGGALE TLSVGGKNAM LCPACQS