| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0370 |
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| Symbol | ispD |
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| ID | 7134540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 320180 |
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| End bp | 320893 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643528782 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002424873 |
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| Protein GI | 218668083 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGCG TCTGGGTGGT GATCCCGGCG GGAGGGCGGG GACAGCGCTT TGGCGCGGCG
CAGGCCAAGC AGTACGTTCT GCTGCGCGAC CGTCCCGTCA TTGCCCACAC CCTGGCGGCC
TTCCTTGGGG AACCGCGAAT TGCCGGCATT CAGCTGGTTC TGCCGGGCGA GGATATTGCC
ACCGGCGCCT GGCGGGAATT GCTGGGACCC ATGCCGGCGC CGCTCCTGCC CCCGGTGGTC
GGGGGCGGCC TGCGTGCCGA TTCGGTGCGC CTTGGTCTGG AGGCGCTGCT GCGACAGGGC
GCGGTGCCGT CCGATTGGGT GCTGGTGCAT GACGCCGCCC GGCCCTGTCT GCGTCGCGAA
GATCTCCTGA GGCTACTGGA AAGTCTTGCG AACGCACCCC AGGGCGCGCT GCTTGCCGTG
CCCGTTGCCG ACACCCTCAA GCGGGGTGAG GATGGATGCT CTTCAGGTAC CGTGGATCGG
GAAGGATTGT GGCGCGCCCT GACTCCGCAG GCGTTCCCTC TCGGGGCGCT GCTGGCGGCC
TTGGAAGCCG CGCGTGCGGG GAACCGGCAA ATCACCGATG AGGCGTCGGC GATGGAGGCG
CAAGGCTGGC GTCCCCGCCT GATCCCGGGA CACGGCGATA ACATCAAGGT AACCCTCAGT
GATGATCTCA TGCTCGCCGC CGCGATTCTC GCGGCGCGTA GTGAAGAAGG ATAA
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| Protein sequence | MERVWVVIPA GGRGQRFGAA QAKQYVLLRD RPVIAHTLAA FLGEPRIAGI QLVLPGEDIA
TGAWRELLGP MPAPLLPPVV GGGLRADSVR LGLEALLRQG AVPSDWVLVH DAARPCLRRE
DLLRLLESLA NAPQGALLAV PVADTLKRGE DGCSSGTVDR EGLWRALTPQ AFPLGALLAA
LEAARAGNRQ ITDEASAMEA QGWRPRLIPG HGDNIKVTLS DDLMLAAAIL AARSEEG
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