Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0341 |
Symbol | rpsH |
ID | 7136548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 298961 |
End bp | 299356 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643528753 |
Product | 30S ribosomal protein S8 |
Protein accession | YP_002424844 |
Protein GI | 218666199 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.498825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGA CGGATCCTAT TGCTGATATG CTGACGCGCA TTCGTAATGC GCAACAGGTA AATAAGGCGA AAGTGCGGAT GCCCGCTTCC AAGCTGAAAC GTGCGATCGC ACGAGTTCTG GTGGAAGAAG GCTATATTCA GGAAGTAAAA GAGGACGTCG CGAACGGTCA CCCCGTTCTC GATCTGACTT TGAAGTATTA TGCTGGTGCG GGTGTGATCG CGGAAATTCG GCGAGTCAGC CGGCCTGGTG TTCGCGTTTA CCGTGGTGCG GAAGATTTGC CGCGCGTGCG TGACGGCTTC GGTATTGCCA TTATCTCAAC GTCTCAGGGA ATTATGACCG ATCGCGCGGC CCGTAGTGCC GGGATTGGTG GTGAAGTTCT CTGCGTCGTG TCCTGA
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Protein sequence | MSVTDPIADM LTRIRNAQQV NKAKVRMPAS KLKRAIARVL VEEGYIQEVK EDVANGHPVL DLTLKYYAGA GVIAEIRRVS RPGVRVYRGA EDLPRVRDGF GIAIISTSQG IMTDRAARSA GIGGEVLCVV S
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